Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0907 |
Symbol | tolB |
ID | 6516208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 881532 |
End bp | 882827 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642746039 |
Product | translocation protein TolB |
Protein accession | YP_002113855 |
Protein GI | 194737053 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.077859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAGC AGGCATTACG AGTAGCATTT GGTTTTCTGA TGCTGTGGGC GGCGGTGCTG CACGCAGAAG TCCGTATCGA GATCACCCAG GGGGTGGACT CGGCGCGACC GATTGGCGTT GTGCCTTTTA AATGGGCCGG GCCGGGCGCT GCGCCTGAAG ATATCGGCGG CATCGTGGCG GCAGATTTAC GCAATAGCGG TAAATTTAAT CCGTTAGACC GGTCCCGACT GCCGCAGCAG CCAGCCACCG CTCAGGAAGT TCAGCCTACC GCATGGTCTG CGCTGGGTAT TGATGCCGTC GTCGTTGGGC AGGTCACGCC GAATCCGGAC GGTTCCTACA ATGTTGCTTA TCAGCTGGTT GACACTGGCG GCGCGCCGGG GACTGTACTG GCGCAAAACT CTTATAAAGT GAACAAGCAG TGGCTGCGTT ATGCAGGCCA CACTGCCAGT GACGAAGTCT TTGAAAAACT GACGGGCATT AAGGGCGCGT TCCGTACTCG TATCGCCTAT GTGGTACAGA CTAACGGCGG TCAGTTCCCG TATGAACTGC GTGTGTCGGA TTACGATGGC TACAATCAGT TCGTAGTGCA CCGTTCTCCG CAGCCGTTGA TGTCTCCGGC GTGGTCTCCG GACGGCTCAA AACTGGCTTA CGTGACATTT GAAAGCGGTC GCTCCGCTCT GGTTATCCAG ACGCTGGCAA ACGGCGCAGT GCGTCAGGTT GCGTCCTTCC CGCGTCACAA CGGCGCGCCG GCCTTCTCGC CGGATGGGAC GAAACTGGCG TTCGCGTTAT CGAAAACCGG AAGTCTGAAC CTGTACGTTA TGGATCTTGC TTCCGGCCAG ATTCGTCAGA TAACGGACGG GCGTAGCAAC AATACGGAGC CGACCTGGTT CCCGGACAGC CAGACTCTGG CCTTTACCTC TGACCAGGCT GGACGTCCGC AAGTGTATAA AATGAACATT AACGGCGGTG CGGCGCAGCG TATTACCTGG GAAGGTTCGC AAAACCAGGA TGCGGATGTC AGCAGCGACG GTAAATTTAT GGTAATGGTA AGCTCAAATA ACGGGCAGCA GCACATTGCC AAACAAGATC TGGTGACGGG TGGCGTACAG GTTCTGTCGT CAACGTTCCT GGATGAAACG CCAAGTCTGG CACCTAACGG CACGATGGTA ATCTACAGCT CTTCTCAGGG GATGGGATCT GTGCTGAATT TGGTTTCTAC AGATGGGCGT TTCAAAGCGC GTCTTCCGGC AACTGATGGT CAGGTGAAAT CGCCTGCCTG GTCGCCGTAT CTGTGA
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Protein sequence | MMKQALRVAF GFLMLWAAVL HAEVRIEITQ GVDSARPIGV VPFKWAGPGA APEDIGGIVA ADLRNSGKFN PLDRSRLPQQ PATAQEVQPT AWSALGIDAV VVGQVTPNPD GSYNVAYQLV DTGGAPGTVL AQNSYKVNKQ WLRYAGHTAS DEVFEKLTGI KGAFRTRIAY VVQTNGGQFP YELRVSDYDG YNQFVVHRSP QPLMSPAWSP DGSKLAYVTF ESGRSALVIQ TLANGAVRQV ASFPRHNGAP AFSPDGTKLA FALSKTGSLN LYVMDLASGQ IRQITDGRSN NTEPTWFPDS QTLAFTSDQA GRPQVYKMNI NGGAAQRITW EGSQNQDADV SSDGKFMVMV SSNNGQQHIA KQDLVTGGVQ VLSSTFLDET PSLAPNGTMV IYSSSQGMGS VLNLVSTDGR FKARLPATDG QVKSPAWSPY L
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