Gene SeSA_A0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0885 
Symbol 
ID6517289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp859674 
End bp860465 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content53% 
IMG OID642746019 
Productendonuclease VIII 
Protein accessionYP_002113835 
Protein GI194734233 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.268436 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAG GCCCGGAAAT TCGTCGTGCG GCGGATAATC TGGAGGCGGC AATCAAAGGC 
AAACCCTTAA CCGATGTCTG GTTTGCCTTT GCACAGTTAA AACCGTATGA ATCGCAGCTT 
ACCGGTCAAA TTGTTACCCG GATAGAGACG CGGGGAAAAG CGTTATTGAC CCACTTTTCA 
AATGGCCTGA CGCTCTACAG CCACAATCAA CTCTATGGCG TATGGCGGGT GATCGATACT 
GGTGAAATAC CGCAGACCAC GCGTATATTG CGCGTCAGGC TACAAACGGC GGATAAAACT 
ATTCTGCTTT ATAGCGCGTC TGATATCGAA ATGCTGACAG CAGACCAGCT CACGACGCAC 
CCTTTTTTAC AGCGAGTCGG CCCGGATGTG CTGGACGCGC GTCTCACTCC GGAAGAGGTT 
AAAGCTCGAT TGCTGTCGCC GCGTTTTCGC AACCGACAAT TTTCCGGGCT GTTGCTGGAT 
CAGGCCTTTC TGGCGGGATT GGGGAATTAT CTTCGCGTTG AAATCCTCTG GCAGGTAGGG 
TTAACCGGAC AGCATAAAGC GAAAGATCTC AACGAGGCGC AACTGAATGC GCTTTCTCAC 
GCGCTGTTGG ATATTCCGCG CCTGTCCTAC ACGACTCGCG GTCAGGCGGA TGAAAACAAG 
CATCATGGCG CACTGTTTCG CTTTAAGGTT TTCCACCGTG ACGGCGAAGC GTGCGAGCGG 
TGCGGCGGCA TTATTGAAAA AACAACACTT TCCTCACGAC CGTTTTACTG GTGCCCGCAT 
TGCCAGAAAT AG
 
Protein sequence
MPEGPEIRRA ADNLEAAIKG KPLTDVWFAF AQLKPYESQL TGQIVTRIET RGKALLTHFS 
NGLTLYSHNQ LYGVWRVIDT GEIPQTTRIL RVRLQTADKT ILLYSASDIE MLTADQLTTH 
PFLQRVGPDV LDARLTPEEV KARLLSPRFR NRQFSGLLLD QAFLAGLGNY LRVEILWQVG 
LTGQHKAKDL NEAQLNALSH ALLDIPRLSY TTRGQADENK HHGALFRFKV FHRDGEACER 
CGGIIEKTTL SSRPFYWCPH CQK