Gene SeSA_A0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0883 
Symbol 
ID6518010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp857471 
End bp859420 
Gene Length1950 bp 
Protein Length649 aa 
Translation table11 
GC content36% 
IMG OID642746017 
Productputative glycosyl transferase 
Protein accessionYP_002113833 
Protein GI194737098 
COG category[R] General function prediction only 
COG ID[COG5610] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.358667 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATGA ACTTTAAAAA ATACAAGACC GTAAGCTTTG ATATCTTTGA TACATTGGTT 
AGCCGGAGGA TTTACCGTCC CAGAGATTTG TTTTCATTAA TGCAATCAAC TTTAGCCACT
GAGAAATTTT TTATATCAGC GTACGAGATT GGTATTATTG ATAATTTCCC AGAGATAAGA
GTTGAGGCGG AAGTAAGTGC CAGAGAGAAT AGGGTCAGGC GTTTTGGCGG CGAGCCGGAA
ATACTTATAT CTGAAATATA CGATGAAATT TTAAAAAAGC ATCCGCAGCT TTCACCAGCG
ACAGTAAAAA AGATAATCGA TCTGGAAATA CAAATGGAGA AGATTGTTTT ATATAAAAAT
GCGCGTGGAA GCTGTTTGTT TGAAAAGGCT ATTAGTGATG GTTGTAAAGT CATTTTAATT
AGTGATATGT ACCTTCCATC AGCAATATTA AAGGAGTTGT TAACATCATG TGGCTATGAT
ATCAGTAACA TTCCAGTTTA TTCATCTGGC GAAGAGCGGT ACTCTAAAAA TAGTGGTAAA
TTATTTTCAA TAGTCAAGAA AAATGAAAAT GTAGATATTG CATCATGGAT GCATGTTGGC
GACAATGTTC ATGCTGATAT TCTGAATGCT AAAAAACTCG GCATAAATAC TCTCCATGCT
GATTGGTCAG AGTATAATCA TGGGGTATCT AATCATTGGA AAACTAAAGA TATTATTGGT
GAATCTATTT GTAAGACTTT ATTACTTAAA CAAGTTTCTG CTTTCCATCA AAATGATCCT
TTAAATGAGA TAGGATTTAA AGTATTTGGT CCGTTATTAT TAGGTTATGT ATCCTGGTTA
GCGAATCAGT TAAAGATTCA TAAAATTGAT AAAGCGCTTT TTTTAGCACG CGATGCTCAC
TTAATCTATA AAATTTATAA TGAATATTTT TCAGAAGAAC ATGTAAAATG TGAATATTTA
TATATATCCC GCGCATCAGC TTATATGGTG GGGATGACTG ATTGGCCGAT GCACAGGATT
TGGCATCTTT TTGGTGGTAA GAATAAGAAA AGTATTAAAA AGATACTTGC TATCGCGGGG
TTAGATGCGA GTGAGCATAT TTCAGATATA CATCATGTTG GCTTTCCTGA CGAGGAATAT
ATTCCTGTTT CAGGAGAGGA ACATAAGGTT CACTGGCTTA TAAATAAATT ATTTCCATAT
ATTTTATTAA AAAATACTCA GCACAGGGAG GTTTACGCTG ATTACTTTAA GACGGCCTGT
GAAGGTTATA AAAATATAGC ACTTATCGAT GTAGGATGGA TGGGTAATAT TCAATCAGTA
TTTGCTCGTT CTTTAGGTGC GCAATGGGCA GAAAAACAAA TACATGGGTT TTATTTGGCA
ACTTTTGCTG GCGCCAATGA TAACCGATCT ATTTATAATA AGATGTTTGG TTGGCTAACC
AACTATGGCC ATCCCCACGA CAAATGTGAT CTTTTCTTAT CAGGAGGGGT GGAAATAATG
GAGTTCGCTA TGGCTGACAA TACCGGGTCA ACAATTGGTT ATAAAAAAAC GGATAATGGA
ATAATTCCTG TACGTGAAGA TAGCAGTGGT TCTGAAATTG AGTATTTAAA AAAAGCGGCA
AGATTGCAAT CAGGGATTAT TTCTTTTTTT GAGTACGTCA AACCGCTCAT ACAAAAAGGA
AATTATGCAG CACTTAGTAG TGTTGTATTG TCAGAACCTT TTTTTGAATT GATAGCCAGA
CCCTCAAGCG CTCAACTGGA CGCCTTATCT TCCCTCACAC ATTCAGAGTC CGCGGGATCT
AACGCAGAAA GAATCGTGCT AGCCAAGAAA CTGCCTTTAA AGGATAAACT TTTTCCCGGA
GAAAATTATA TCAAAGAGTT GAATGCCAGT TATTGGAAAG AAGGCTTTAA AAGGATCAAC
AGAAAAAAAT TTTGGGCAAA ATATAACTAA
 
Protein sequence
MDMNFKKYKT VSFDIFDTLV SRRIYRPRDL FSLMQSTLAT EKFFISAYEI GIIDNFPEIR 
VEAEVSAREN RVRRFGGEPE ILISEIYDEI LKKHPQLSPA TVKKIIDLEI QMEKIVLYKN
ARGSCLFEKA ISDGCKVILI SDMYLPSAIL KELLTSCGYD ISNIPVYSSG EERYSKNSGK
LFSIVKKNEN VDIASWMHVG DNVHADILNA KKLGINTLHA DWSEYNHGVS NHWKTKDIIG
ESICKTLLLK QVSAFHQNDP LNEIGFKVFG PLLLGYVSWL ANQLKIHKID KALFLARDAH
LIYKIYNEYF SEEHVKCEYL YISRASAYMV GMTDWPMHRI WHLFGGKNKK SIKKILAIAG
LDASEHISDI HHVGFPDEEY IPVSGEEHKV HWLINKLFPY ILLKNTQHRE VYADYFKTAC
EGYKNIALID VGWMGNIQSV FARSLGAQWA EKQIHGFYLA TFAGANDNRS IYNKMFGWLT
NYGHPHDKCD LFLSGGVEIM EFAMADNTGS TIGYKKTDNG IIPVREDSSG SEIEYLKKAA
RLQSGIISFF EYVKPLIQKG NYAALSSVVL SEPFFELIAR PSSAQLDALS SLTHSESAGS
NAERIVLAKK LPLKDKLFPG ENYIKELNAS YWKEGFKRIN RKKFWAKYN