Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0879 |
Symbol | |
ID | 6515572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 853136 |
End bp | 853906 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642746013 |
Product | O-antigen export system, permease |
Protein accession | YP_002113829 |
Protein GI | 194734583 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.17819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGATT TGAAAGAAGC TCTGGCCAGG CACCAACTTT GGATTTCGCT AGGTTGGAAT GATGTCCTGG GACGATACCG GCGATCGGTG TTAGGGCCTT TTTGGATAAC GATTTCGATG GGGGTCACCA TATCAGCAAT GGGACCTCTT TACGGTTCGC TGTTCAGTTC TGGTTCCGAA AATTTTATCA TGCATCTTAC TTTAGGTATG ATCTTTTGGG CCTTTCTATC AGCAACTATT AATGAGTCAT GCGGAATATT TAATGAGTCC GCATCAATTA TTAAACAATC TGACCTTCCG CTATATTTAT ATATATTACG TGTTTTCTAT CGGCAGTTTA TGATTATGTT GCATAATTTT ATCATTATAC CTTTCGTGAT TTTTTTTACC AATACATCGG TAAATCTTGA TATTCTCCTT TTTATACCTG CAATTATAAT AACATCCATC TCATTAATTT CTACAGGTAT GATTCTCGCC ATTTTTTGCA CAAGATATCG TGATATGGGA CCGGTTGTTC AAAGTGTAGT AACGTTGTGT TTTTTTATAA CTCCTATCAT CTGGACATCG GAACAATTAC CAAAGGGAAG AAAGGAATTT GTTGATTATA ATATTTTTTA TTACTTTATG GAGATGCTCA GGAAACCACT AATGGGAACT GTACCAGATG TAACTATATG GTTTTACACA ATAATAACCT CTATTATTAT GTTGATGGTC TCAACCTTAG TGTTGACTAA ATATCGCTCA AGAATCGTAT ACTGGTTATA A
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Protein sequence | MNDLKEALAR HQLWISLGWN DVLGRYRRSV LGPFWITISM GVTISAMGPL YGSLFSSGSE NFIMHLTLGM IFWAFLSATI NESCGIFNES ASIIKQSDLP LYLYILRVFY RQFMIMLHNF IIIPFVIFFT NTSVNLDILL FIPAIIITSI SLISTGMILA IFCTRYRDMG PVVQSVVTLC FFITPIIWTS EQLPKGRKEF VDYNIFYYFM EMLRKPLMGT VPDVTIWFYT IITSIIMLMV STLVLTKYRS RIVYWL
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