Gene SeSA_A0861 details

Gene Information

• Locus tag: SeSA_A0861
• ID: 6516292
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633
• Kingdom: Bacteria
• Replicon accession: NC_011094
• Strand: -
• Start bp: 832780
• End bp: 835497
• Gene Length: 2718 bp
• Protein Length: 905 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 642745995
• Product: sensor protein KdpD
• Protein accession: YP_002113811
• Protein GI: 194735142
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2205] Osmosensitive K+ channel histidine kinase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACGACG AACCCTTGCG TCCTGATCCG GATCGCTTGT TGGAACAAAC GCCCCCGCCC 
CACCGGGGGA AGTTGAAAAT TTTCTTCGGC GCCTGCGCAG GCGTCGGAAA AACCTGGGCG 
ATGCTGGCGC AAGCGCAGCG GCTGCGAGCG CAGGGGCTGG ATGTGGTGAT CGGCGTGGTA 
GAAACGCATG GCCGTAAAGA GACCGCCGCG CTACTTGACG GGCTGACCAT TCTGCCGCCA 
AAACGTCACT CGCACCGGGG GCGGCAAATC CGCGAATTTG ACCTGGATGC CGCCCTCGCC 
CGGCGTCCGG CGCTGATTTT AATGGATGAG CTGGCGCACA GTAACGCGCC TGGCTCACGC 
CATCCTAAGC GCTGGCAGGA TATTGAAGAG CTGCTGGAAG CGGGAATCGA CGTTTTCACC 
ACCGTGAACG TACAACATCT GGAAAGTCTG AACGATGTGG TGAGCGGCGT CACGGGGATT 
CAGGTGCGCG AAACCGTCCC CGATCCCTTT TTTGATGCCG CCGATGAAGT CGTACTGGTC 
GATCTGCCGC CCGACGATCT GCGCCAACGA CTCAACGAAG GTAAAGTGTA TATCGCCGGT 
CAGGCGGAAC GCGCTATTGA ACATTTTTTC CGCAAGGGCA ATCTGATCGC CCTCCGCGAG 
CTGGCGCTAC GCCGGACAGC CGATCGCGTG GACGATCAGA TGCGCGCCTG GCGCGCGCAT 
CCGGGCGAAG AAAAAGTATG GCATACCCGC GATGCGATTT TACTGTGTAT CGGGCATAAC 
ACCGGCAGCG AAAAACTGGT GCGTACCGCG GCGCGTCTGG CCTCCCGGCT CGGCAGCGTC 
TGGCACGCCG TCTATGTCGA AACGCCAACG TTACACCGCT TACCGGAAAA GCAACGACGG 
GCCATTTTAA GCGCGCTGCG CCTGGCTCAG GAGCTTGGCG CGGAAACCGC CACCCTGTCC 
GATCCCGCCG AAGAGAAAGC GGTCGTGCGC TATGCCCGCG AGCATAATCT GGGGAAAATC 
GTCATGGGCC GCCCGGCGTC GCGACGCTGG TGGCGACGTG ACGCTTTCGC CGACCGTCTT 
GCCAGGCGCG CGCCGGATCT CGATCAGGTG ATCGTCGCGC TGGAAGAACC GCCTGCCCGC 
GCGTTGGCGC AAACGCCTGA TAACCGACCT TTTAAAGAGA AATGGCGTGG GCAGATTCAG 
GGCTGTCTGG TCGCCGTGGC GCTTTGCGCC ATCACCACGC TTATCGCTAT GCAGTGGCTT 
GTCACCTTCG ACGCCGCCAA TCTGGTGATG CTCTATTTGC TGGGCGTAGT GGTGATTGCG 
CTGCTTTACG GACGCTGGCC GTCGGTGGTA GCGACGGTGA TTAACGTGGC GAGTTTCGAT 
CTCTTTTTTA TCGCGCCACG CGGTACGCTC GCCGTTTCGG ACGTGCAGTA TTTGCTGACC 
TTTGCCGTGA TGCTGACGGT AGGTCTGGTG ATTGGCAATC TTACTGCCGG GGTGCGCTAT 
CAGGCGCGCG TCGCCCGTTA TCGGGAACAG CGTACCCGTC ATTTATATGA AATGTCTAAA 
GCGCTGGCCG TCGGGCGTAG CGAACATGAT ATCGCCGCGA CCAGCGAGCG GTTTATCGCC 
TCGACGTTTC AGGCGCGCAG CCAAATTTTA TTACCTGATG CTAACGGTAA GTTGCTGCCT 
CTCACCCACC AGCAAGGCAT GACGCCGTGG GACGACGCAA TTGCGCGCTG GAGTTTTGAT 
AAAGGCCAGC CTGCCGGCGC AGGCACCGAT ACCCTCCCTG GCGTGCCTTA TCAAATCCTG 
CCGCTGAAAA GCGCCGATAA AACATACGGT CTGGCTATCG TCGAACCGGG TAATTTGCGT 
CAGTTAATGG TGCCGGAGCA GCAACGCCTG CTGGAAACAT TTACTCTGCT TGTCGCCAAC 
GCGCTGGAAC GACTGACGCT GACCGCCAGC GAAGAACAGG CGCGTCTCGC CAGCGAGCGA 
GAAAGTATTC GCAACGCTCT GCTGGCGGCG CTGTCGCATG ATTTACGCAC GCCGCTGACG 
GTATTGTTCG GCCAGGCGGA AATTTTGACG CTGGATTTAG CCAGCGCAGG ATCGCCCCAC 
GCGCGTCAGG CCAGTGAAAT CCGCCAGCAT ATTCTCAACA CCACCCGGCT GGTGAATAAT 
TTGCTGGATA TGGCGCGTAT TCAGTCCGGC GGGTTTAATC TTAAAAAAGA GTGGCTGACG 
CTGGAAGAGG TCGTCGGTAG CGCGTTACAG ATGTTAGAGC CGGGTTTATT GCATCCGATT 
ACATTGTCGC TGCCGCAACA GTTAACGCTT ATCCATGTCG ATGGCCCCTT ATTTGAGCGT 
GTCCTGATCA ACTTGCTGGA AAACGCCGTT AAGTACGCCG GGCCGCAGGC CAGTATCGGC 
ATTGATGCTG CGGTTAAGGA CGATCGTTTA CAACTGGATG TCTGGGATAA CGGGCCGGGT 
ATTCCTGCGG GGCAAGAACA GAAGATTTTC GATAAGTTCG CCCGCGGCAA CAAAGAGTCC 
GCCGTCCCCG GCGTGGGGCT GGGGCTGGCG ATTTGCCATG CTATCGTAGA GGTACACGGC 
GGCACGCTTA CCGCCTATAA TCGACCGCAG GGCGGCACGC TTACCGCCTA TAATCGACCG 
CAGGGCGGCG CCTGTTTCCG TGTGACGCTG CCGCAAGGAA AGCCACCTGA ACTTGATGAT 
TTTCATGAGG ATATGTGA 

 

Protein sequence

MNDEPLRPDP DRLLEQTPPP HRGKLKIFFG ACAGVGKTWA MLAQAQRLRA QGLDVVIGVV 
ETHGRKETAA LLDGLTILPP KRHSHRGRQI REFDLDAALA RRPALILMDE LAHSNAPGSR 
HPKRWQDIEE LLEAGIDVFT TVNVQHLESL NDVVSGVTGI QVRETVPDPF FDAADEVVLV 
DLPPDDLRQR LNEGKVYIAG QAERAIEHFF RKGNLIALRE LALRRTADRV DDQMRAWRAH 
PGEEKVWHTR DAILLCIGHN TGSEKLVRTA ARLASRLGSV WHAVYVETPT LHRLPEKQRR 
AILSALRLAQ ELGAETATLS DPAEEKAVVR YAREHNLGKI VMGRPASRRW WRRDAFADRL 
ARRAPDLDQV IVALEEPPAR ALAQTPDNRP FKEKWRGQIQ GCLVAVALCA ITTLIAMQWL 
VTFDAANLVM LYLLGVVVIA LLYGRWPSVV ATVINVASFD LFFIAPRGTL AVSDVQYLLT 
FAVMLTVGLV IGNLTAGVRY QARVARYREQ RTRHLYEMSK ALAVGRSEHD IAATSERFIA 
STFQARSQIL LPDANGKLLP LTHQQGMTPW DDAIARWSFD KGQPAGAGTD TLPGVPYQIL 
PLKSADKTYG LAIVEPGNLR QLMVPEQQRL LETFTLLVAN ALERLTLTAS EEQARLASER 
ESIRNALLAA LSHDLRTPLT VLFGQAEILT LDLASAGSPH ARQASEIRQH ILNTTRLVNN 
LLDMARIQSG GFNLKKEWLT LEEVVGSALQ MLEPGLLHPI TLSLPQQLTL IHVDGPLFER 
VLINLLENAV KYAGPQASIG IDAAVKDDRL QLDVWDNGPG IPAGQEQKIF DKFARGNKES 
AVPGVGLGLA ICHAIVEVHG GTLTAYNRPQ GGTLTAYNRP QGGACFRVTL PQGKPPELDD 
FHEDM