Gene SeSA_A0858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0858 
Symbol 
ID6515301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp829145 
End bp831343 
Gene Length2199 bp 
Protein Length732 aa 
Translation table11 
GC content54% 
IMG OID642745992 
Productornithine decarboxylase 
Protein accessionYP_002113808 
Protein GI194736885 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1982] Arginine/lysine/ornithine decarboxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAT TAAAAATTGC CGTTAGCCGT CATTGCCCGG ATTGTTTTTC TACACACCGT 
AATATTGTAA ATGTTGATGA GAGTCGTTTC ATCGACGTGG CTGCCATCGT GTTATCCATC
GACGACATTG AACACGGAAA ACTCGATGAA ATCGACGCAA CGGGTTACGG TATTCCCGTG
TTTGTCGCGA CTCATGACGA AGGGCGCGTA CCGCCTGAGT ATTTGCCGCG TATCTCTGGT
GTATTCGAAT ATAATGAATC CCGTACTGCC TTCTATGGTC GTCAGTTGGA AACCGCAGCA
AGCCACTACG AAACGCAGTT ACGTCCGCCG TTTTTCCGCG CGCTGGTGGA TTATGTCAAC
CAGGGCAACA GCGCATTTGA CTGCCCGGGG CACCAGGGCG GCGAATTCTT CCGCCGTCAT
CCTGCCGGTA ATCAGTTCGT GGAATACTTT GGCGAAACGC TCTTCCGCTC CGACCTATGC
AACGCGGACG TGGCGATGGG CGATCTGCTG ATTCACGAAG GCGCGCCTTG CATTGCGCAG
CAACATGCGG CGAAAGTCTT TAACGCCGAT AAGACCTACT TTGTGCTGAA CGGGACCTCC
TCCTCTAACA AAGTCGTACT CAACGCGCTG TTAACGCCGG GCGATCTGGT ACTGTTTGAC
CGTAACAACC ACAAATCTAA CCACCACGGC GCATTATTGC AGGCGGGCGC AACGCCAGTT
TATCTGGAAA CCGCACGTAA CCCGTATGGT TTTATCGGCG GGATCGACGC TCACTGCTTC
GAAGAAGATT ACCTGCGCGA GCTGATTAGC GAAGTCGCGC CGCAGCGTGC CCGCGAAGCA
CGTCCATTCC GTCTGGCCGT CATCCAGTTA GGCACCTACG ACGGTACCAT TTATAACGCC
CGTCAGGTCG TCGATAAAAT TGGTCATCTG TGCGACTACA TCCTGTTTGA CTCCGCCTGG
GTCGGCTATG AACAATTTAT TCCGATGATG GCCGATTGTT CGCCGCTGCT GCTGGAACTG
AACGAAAACG ATCCGGGTAT TCTGGTGACG CAGTCCGTTC ACAAACAACA AGCCGGTTTC
TCCCAGACCT CGCAGATCCA TAAAAAAGAT AGCCATATCA AAGGGCAATC GCGCTACGTT
CCGCATAAGC GCATGAACAA CGCCTTTATG ATGCACGCCT CCACCAGCCC GTTCTATCCG
CTGTTCGCCG CGCTGGACGT TAACGCCAAA ATGCACGAAG GCGTCAGCGG TCGCAATATG
TGGATGGATT GCGTGGTTAA CGGCATCGAT GCCCGTAAAT TGATCCTCGA AAACTGTCAT
CACATCCGTC CGTTCGTACC GGAACTGATT GATGGTAAGC CGTGGCAGTC ATACCCGACG
TCAGAGATCG CCAGCGATCT GCGCTTCTTC CACTTCGTTC CGGGAGAACA CTGGCATGCG
TTTGAAGGCT ATGCCGAACA TCAGTACTTT GTCGACCCTT GCAAACTGCT GCTCACCACA
CCGGGCATTA ATGCAGCGAG CGGCGAATAT GAAGACTTTG GCGTTCCTGC CACGATCCTC
GCCAACTTCC TGCGCGAGAA CGGCGTTGTG CCGGAAAAAT GCGACCTCAA CTCCATTCTG
TTCCTGCTGA CGCCGGCAGA AGACATGGCG AAGTTACAAC AGCTTGTCGC CCTGCTGGCT
CGTTTCGAAA AACTGCTGGA AGCTGATGCG CCGTTAGCGG AAGTATTACC GTCCATCTAC
AAACAGCATG AAGCGCGTTA TGCCGGCTAC ACCCTGCGTC AGCTTTGCCA GGAGATGCAC
GATCTCTATG CGCGGCACAA CGTGAAACAG CTGCAAAAAG AGATGTTCCG TAAATCGCAT
TTCCCGAAAG TCAGTATGAA TCCGCAAGAG GCCAACTATG CCTATCTGCG CGGCGAGGTC
GAACTGGTTC GCCTGCCGGA AGCGGAAGGT CGTATCGCGG CTGAAGGCGC TCTGCCTTAC
CCGCCGGGAG TGCTGTGTGT AGTTCCGGGT GAAATCTGGG GCGGTTCTGT CCTGCGTTAC
TTCAGCGCCC TGGAAGAAGG GATCAACCTG CTGCCGGGCT TTGCGCCTGA ACTGCAGGGC
GTTTATATCG AAGAACACGA CGGCCGTAAG CAGGTCTGGT GCTACGTCAT TAAACCTCGT
GACGCGCAGC GCTCCCTGCT GAAGGAGGAA AAATTATGA
 
Protein sequence
MSELKIAVSR HCPDCFSTHR NIVNVDESRF IDVAAIVLSI DDIEHGKLDE IDATGYGIPV 
FVATHDEGRV PPEYLPRISG VFEYNESRTA FYGRQLETAA SHYETQLRPP FFRALVDYVN
QGNSAFDCPG HQGGEFFRRH PAGNQFVEYF GETLFRSDLC NADVAMGDLL IHEGAPCIAQ
QHAAKVFNAD KTYFVLNGTS SSNKVVLNAL LTPGDLVLFD RNNHKSNHHG ALLQAGATPV
YLETARNPYG FIGGIDAHCF EEDYLRELIS EVAPQRAREA RPFRLAVIQL GTYDGTIYNA
RQVVDKIGHL CDYILFDSAW VGYEQFIPMM ADCSPLLLEL NENDPGILVT QSVHKQQAGF
SQTSQIHKKD SHIKGQSRYV PHKRMNNAFM MHASTSPFYP LFAALDVNAK MHEGVSGRNM
WMDCVVNGID ARKLILENCH HIRPFVPELI DGKPWQSYPT SEIASDLRFF HFVPGEHWHA
FEGYAEHQYF VDPCKLLLTT PGINAASGEY EDFGVPATIL ANFLRENGVV PEKCDLNSIL
FLLTPAEDMA KLQQLVALLA RFEKLLEADA PLAEVLPSIY KQHEARYAGY TLRQLCQEMH
DLYARHNVKQ LQKEMFRKSH FPKVSMNPQE ANYAYLRGEV ELVRLPEAEG RIAAEGALPY
PPGVLCVVPG EIWGGSVLRY FSALEEGINL LPGFAPELQG VYIEEHDGRK QVWCYVIKPR
DAQRSLLKEE KL