Gene SeSA_A0845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0845 
Symbol 
ID6516086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp817137 
End bp818441 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content54% 
IMG OID642745979 
Productcitrate-proton symporter 
Protein accessionYP_002113795 
Protein GI194735288 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00883] metabolite-proton symporter 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAC ACACACCTGC AACATCGCGC GCCGGCACGT TCGGCGCAAT ACTGCGCGTG 
ACAAGCGGCA ATTTTCTTGA ACAGTTTGAT TTTTTCTTGT TCGGATTTTA CGCCACCTAT
ATCGCCAGAA CGTTTTTTCC GGCGGAAAGC GAATTTGCCT CATTAATGTT GACCTTTGCC
GTCTTTGGCT CCGGTTTTTT AATGCGCCCC GTCGGCGCGA TTGTGCTTGG CGCCTATATT
GACAGAATCG GACGCCGTAA AGGGCTGATG GTGACGCTGG CGATTATGGG CTGCGGTACG
TTGCTCATCG CCCTCGTCCC CGGCTACCAA ACGATCGGCC TGGCAGCGCC TGCGTTGGTG
CTGTTGGGCC GGTTATTACA AGGATTTTCT GCGGGCGTTG AGTTAGGCGG CGTCTCGGTC
TATCTGTCCG AAATCGCAAC GCCAGGCAAT AAAGGGTTTT ATACCAGCTG GCAATCTGCC
AGTCAGCAGG TCGCGATCGT TGTCGCCGCG TTGATTGGTT ATAGCCTGAA TATCACGCTG
GGACACGACG CGATATCGGA GTGGGGCTGG CGAATTCCGT TCTTTATCGG CTGTATGATC
ATTCCGCTGA TTTTTGTTTT ACGTCGTTCA TTACAAGAAA CAGAAGCGTT TTTACAACGC
AAGCATCGCC CCGACACCAG GGAAATTTTT GCAACTATCG CCAAAAACTG GCGCATTATT
ACAGCCGGAA CGCTGCTGGT GGCGATGACC ACCACAACGT TTTATTTTAT CACCGTTTAT
ACGCCGACCT ATGGCAGAAC CGTGCTTAAT CTCAGCGCGC GGGACAGTTT GATCGTCACC
ATGTTAGTGG GGGTGTCCAA TTTTATCTGG TTACCCATTG GCGGCGCGAT TTCCGACCGG
ATTGGCCGTC GCGCCGTGTT AATGGGCATT ACGTTGCTGG CGCTGATCAC CACCTGGCCC
GTCATGCAGT GGCTGACCGC CGCGCCCGAC TTTACCCGCA TGACGCTGGT ACTGCTGTGG
TTCTCTTTCT TTTTTGGCAT GTATAACGGC GCAATGGTCG CGGCGTTAAC CGAAGTGATG
CCAGTCTATG TGCGTACCGT TGGTTTCTCG CTGGCCTTTA GCCTGGCGAC GGCGATTTTT
GGCGGCCTGA CGCCGGCCAT CTCTACCGCG CTGGTAAAGT TAACCGGCGA TAAAAGCTCG
CCCGGCTGGT GGCTGATGTG CGCAGCGTTA TGTGGACTTG CCGCGACGGC GATGCTGTTT
GTACGTCTGA GTCGCGGCTA TATCGCGGCA GAAAATAAAG CCTGA
 
Protein sequence
MAQHTPATSR AGTFGAILRV TSGNFLEQFD FFLFGFYATY IARTFFPAES EFASLMLTFA 
VFGSGFLMRP VGAIVLGAYI DRIGRRKGLM VTLAIMGCGT LLIALVPGYQ TIGLAAPALV
LLGRLLQGFS AGVELGGVSV YLSEIATPGN KGFYTSWQSA SQQVAIVVAA LIGYSLNITL
GHDAISEWGW RIPFFIGCMI IPLIFVLRRS LQETEAFLQR KHRPDTREIF ATIAKNWRII
TAGTLLVAMT TTTFYFITVY TPTYGRTVLN LSARDSLIVT MLVGVSNFIW LPIGGAISDR
IGRRAVLMGI TLLALITTWP VMQWLTAAPD FTRMTLVLLW FSFFFGMYNG AMVAALTEVM
PVYVRTVGFS LAFSLATAIF GGLTPAISTA LVKLTGDKSS PGWWLMCAAL CGLAATAMLF
VRLSRGYIAA ENKA