Gene SeSA_A0801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0801 
Symbol 
ID6515974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp777269 
End bp777736 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content57% 
IMG OID642745936 
ProductrRNA large subunit methyltransferase 
Protein accessionYP_002113759 
Protein GI194735265 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000227115 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCTGC AACTTGTCGC TGTCGGCACG AAGATGCCCG ACTGGGTTCA AACGGGATTT 
ACGGAATATC TGCGTCGTTT TCCGAAAGAT ATGCCCTTTG AGCTGATCGA AATCCCTGCG
GGCAAACGCG GCAAGAACGC GGATATCAAA CGCATTCTCG ACAAAGAGGG CGAGCAGATG
CTGGCCGCCG CCGGTAAGAA TCGCATTGTT ACCCTGGATA TTCCAGGCAA GCCGTGGGAT
ACGCCGCAGT TAGCCAATGA GCTGGAGCGC TGGAAACAGG ACGGGCGCGA CGTCAGTTTG
CTGATTGGCG GCCCGGAAGG ATTATCTCCC GCCTGCAAAG CGGCAGCGGA ACAGAGCTGG
TCGCTCTCGG CGTTAACGCT CCCTCACCCA CTGGTTCGGG TTCTGGTCGC GGAGAGTTTG
TACCGGGCGT GGAGCATCAC AACCAACCAC CCTTATCACC GTGAGTGA
 
Protein sequence
MKLQLVAVGT KMPDWVQTGF TEYLRRFPKD MPFELIEIPA GKRGKNADIK RILDKEGEQM 
LAAAGKNRIV TLDIPGKPWD TPQLANELER WKQDGRDVSL LIGGPEGLSP ACKAAAEQSW
SLSALTLPHP LVRVLVAESL YRAWSITTNH PYHRE