| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0785 |
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| Symbol | dpiA |
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| ID | 6519251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 762983 |
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| End bp | 763663 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642745920 |
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| Product | two-component response regulator DpiA |
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| Protein accession | YP_002113743 |
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| Protein GI | 194733943 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4565] Response regulator of citrate/malate metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.124053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.689385 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGAAC CATTAACCCT ATTGATCGTT GAGGATGAAA CGCTGCTGGC GGAGATGCAC
GCAGAATATA TCCGCCATAT TCCTGGCTTT AAGCAGATAT GGCTGGCGGG CAATCTGGCG
CAGGCGAGAA TGATGATTGA CCGGTTCAAA CCTGGATTAA TTCTGTTGGA TAATTATCTG
CCGGATGGGA AGGGGATTAC GCTGCTGCAT GAATTAATGC AGTCGCGCTA TCCCGGCGGC
GTCGTGTTTA CGACCGCCGC CAGTGACATG GAGACGGTAG CGGAAGCGGT ACGTAGCGGC
GCGTTTGATT ATCTGGTCAA ACCTATTGCT TATGAACGTT TGGGACAGAC GCTGACCCGC
TATCAACAGC GCAGACGTAT GCTGGCGAGC GCGGATAGCG CAAGCCAGAA GCAGATAGAT
GAAATGTTCA ACGCCTATGC GCGCGGCGAA CCGAAAGGGG ATTTGCCGAC CGGTATTGAT
GCCTTAACCC TTAATGCGGT GATGAAGCTG TTTGCCGATC CAACCGTACG CCACACGGCT
GAAACGGTCG CGCAGGCCTT AACAATAAGC CGCACCACAT CCCGACGCTA CCTGGAATAT
TGCGCGAGTC AGCACCTGAT TGTCGCAGAG ATTATTCATG GCAAAGTGGG CAGGCCGCAG
CGTATTTACC ACGGCGGCTA A
|
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| Protein sequence | MTEPLTLLIV EDETLLAEMH AEYIRHIPGF KQIWLAGNLA QARMMIDRFK PGLILLDNYL
PDGKGITLLH ELMQSRYPGG VVFTTAASDM ETVAEAVRSG AFDYLVKPIA YERLGQTLTR
YQQRRRMLAS ADSASQKQID EMFNAYARGE PKGDLPTGID ALTLNAVMKL FADPTVRHTA
ETVAQALTIS RTTSRRYLEY CASQHLIVAE IIHGKVGRPQ RIYHGG
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