Gene SeSA_A0783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0783 
SymbolcitC 
ID6518582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp759891 
End bp760967 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content52% 
IMG OID642745918 
Product[citrate (pro-3S)-lyase] ligase 
Protein accessionYP_002113741 
Protein GI194734902 
COG category[C] Energy production and conversion 
COG ID[COG3053] Citrate lyase synthetase 
TIGRFAM ID[TIGR00124] [citrate (pro-3S)-lyase] ligase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.46183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.28967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGCA ATAATGTATT CACTCGGGTA AAACGCTCTG AAAATAAAAA AATGGCGGAG 
ATCGCTCACT TTCTCAAAGA GAATGATTTA AGCGTCGATA CCACTGTAGA GGTGTTTATT 
ACCGTCAGCC GTGATGACCG TCTTATTGCC TGCGGCGGTA TTGCCGGAAA TATCATTAAA 
TGCGTGGCCA TTAGCGAATC AGTACGCGGC GAAGGCTTAG CGTTAACGCT AGCGACGGAA 
TTGATTAATC TCGCCTGGGA ACGGCACTGC ACCCATCTTT TTATTTATAC CAAAACGGAA 
TACGAAGCGC TGTTTAAACA GTGCAGCTTT TCGACGATAG CCAGCGTCCC CGGCGTGATG 
GTCTTAATGG AAAATAGCGC GACCCGGTTG AAACGGTATG CGGAATCGCT GGCGACATTA 
CGTCACGAGG GAAAGAAAAT TGGCTGTATT GTGATGAACG CCAATCCTTT CACGAACGGC 
CACCGCTATC TGATCCAACA GGCGGCTGCG CAGTGCGACT GGCTGCATCT GTTCCTGGTC 
AAAGAAGATA CGTCACGCTT TCCCTATGAA GACCGACTCG ATCTGGTCCT TAAAGGGACC 
ACCGATATCC CGCGCTTAAC CGTTCACCGC GGCTCCGAAT ACATTATCTC TCGGGCAACG 
TTCCCCTGCT ATTTCATTAA AGAGCAGAGC GTCATTAATC ACTGTTATAC CGAAATCGAC 
CTGAAGATTT TCCGCCAGTA TCTGGCGCCC GCGCTTGGCA TCACACACCG CTTTGTCGGT 
ACGGAGCCGT TTTGCACCGT TACCGCCCAG TACAACCTTG ATATGCGTTT CTGGCTGGAG 
ACGCCAACGC TTCCCGCCCC ACCCATTACG CTGGTGGAAA TAGAGCGGCT TTGCTTCCAG 
GAGACGCCGA TATCCGCCTC CTGGGTACGC AAGCTGCTGG TTAAACACGA TCTCACGGCT 
ATCGCGCCGC TGGTTCCCGA CGCCACCCTG CGCTATTTGC AGGGCATGGT CGAACGCCAT 
CCGGGCAGCG CGGCAGCCCG TCAAAAGTCC CCCGTATTAG CAACAGGTGA AAAATGA
 
Protein sequence
MFGNNVFTRV KRSENKKMAE IAHFLKENDL SVDTTVEVFI TVSRDDRLIA CGGIAGNIIK 
CVAISESVRG EGLALTLATE LINLAWERHC THLFIYTKTE YEALFKQCSF STIASVPGVM 
VLMENSATRL KRYAESLATL RHEGKKIGCI VMNANPFTNG HRYLIQQAAA QCDWLHLFLV 
KEDTSRFPYE DRLDLVLKGT TDIPRLTVHR GSEYIISRAT FPCYFIKEQS VINHCYTEID 
LKIFRQYLAP ALGITHRFVG TEPFCTVTAQ YNLDMRFWLE TPTLPAPPIT LVEIERLCFQ 
ETPISASWVR KLLVKHDLTA IAPLVPDATL RYLQGMVERH PGSAAARQKS PVLATGEK