Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0781 |
Symbol | citE |
ID | 6517308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 758693 |
End bp | 759601 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642745916 |
Product | citrate (pro-3S)-lyase, beta subunit |
Protein accession | YP_002113739 |
Protein GI | 194736633 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | [TIGR01588] citrate lyase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.44905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.283656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTCCG CCTCTCTGCA ACAACGTAAA ACCCGCACCC GCCGCAGTAT GTTATTCGTA CCGGGCGCCA ACGCAGCGAT GGTGAGCAAT TCGTTTATCT ACCCGGCCGA CGCGCTGATG TTCGACCTGG AAGACTCCGT TGCATTACGC GAAAAAGACG CGGCGCGCCG TCTGGTATAT CACGCGCTGC AACACTCGCT TTACCGTGAC GTCGAAACCA TCGTCCGCGT GAATGCGCTG GACTCCGAAT GGGGCGTCAA CGATCTGGAA GCGGTCGTGC GCGGCGGCGC GGACGTGGTG CGTTTACCGA AAACCGACAC CGCGCAGGAC GTCATTGATA TCGAAAACGA AATTCTGCGC ATTGAAAACG CCTGCGGTCG CGAACCGGGC AGTACCGGCC TGTTAGCCGC CGTGGAATCG CCGCTGGGTA TTACCCGCGC GGTAGAAATC GCCCACGCCT CTGAACGGTT GATCGGGATT GCGCTGGGCG CGGAAGACTA TGTTCGCAAC CTGCGCACCG AACGCTCTCC GGAAGGCACC GAACTGCTGT TCGCCCGCTG CGCCATTTTG CAGGCTGCGC GTTCCGCCGG CATTCAGGCC TTCGATACCG TCTATTCCGA CGCCAACAAC GAAGCCGGTT TCCTGCAAGA AGCCGCCCAC ATTAAACAGT TGGGCTTTGA CGGTAAGTCA CTGATCAACC CCCGCCAGAT AGAGCTGCTG CACAACCTTT ATGCGCCGAC GCGTAAAGAG GTCGTCCATG CGCGTCTGGT CGTTGAAGCC GCAGAAGCCG CCGCCCGCGA AGGTCTTGGC GTCGTTTCCC TTAACGGCAA GATGGTCGAC AGTCCGGTGA TTGAACGCGC CCGTCTGGTG CTCTCCCGTG CAGAACTTTC CGGTATTCGC GAAGAATAA
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Protein sequence | MISASLQQRK TRTRRSMLFV PGANAAMVSN SFIYPADALM FDLEDSVALR EKDAARRLVY HALQHSLYRD VETIVRVNAL DSEWGVNDLE AVVRGGADVV RLPKTDTAQD VIDIENEILR IENACGREPG STGLLAAVES PLGITRAVEI AHASERLIGI ALGAEDYVRN LRTERSPEGT ELLFARCAIL QAARSAGIQA FDTVYSDANN EAGFLQEAAH IKQLGFDGKS LINPRQIELL HNLYAPTRKE VVHARLVVEA AEAAAREGLG VVSLNGKMVD SPVIERARLV LSRAELSGIR EE
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