Gene SeSA_A0714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0714 
Symbol 
ID6519294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp689969 
End bp690739 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content42% 
IMG OID642745853 
Productpolar amino acid ABC transporter periplasmic amino acid-binding protein 
Protein accessionYP_002113676 
Protein GI194737334 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0236853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TATATTTTAT GTTTGTTATC TTGTTGTCAC TTTCAGGTAT TCATTCCGCG 
ATGGCAAAAC CCTGGCAGGA GATTAAAGAA AGCAAAGAGT TACGTGTGGG GGTGCCTAGT
GACTATGCTC CCCTCGCATT TCACAACAGA CAAAATAAAT TAATCGGTTT TGATATTGAT
ATGGCATATT CACTGGGCAA AGCTCTGCAC CTGAATATCC TGTTTGTACC TAGCAGTTGG
CCTACGCTGT CAACTGACCT GGCAGCAGAC AAATTTGATA TTGCAATGGG AGGGATTACA
GAAACTCCCG GCAGAAGAAA ACAGTTCGCA CTTTCTTCTC CGGTACTTAA AAATGGGAAA
ATAGCGCTGA CGCAATGTAA CAGGATTAAT GACTTCAAAT CTCTTGAAGA TATTGACCGT
AAGGGCGTGC GGATTGTTGT TAATCCAGGT GGTACAAATC AGGACTATGT TGACAAGCAT
ATCAGGTATG CAGATGTTAT TCGCGAAAAA GATAATGATG CCACTCTGCA GAGGATTCGT
GAACGCAGCG CTGATGTCAT GTTTACCGAC TTGCTCGAAG GTAATTATTA CCAGAACAAA
GAGCCAGGTG TCTTCTGCGT ATCAACCAGG AGTATCCTCC CCGACACTGC CGGTAATAAA
GTCTATATGA TGGCGAAGGA TAATCAGTAT CTTCTTGACG CTGTAAATAG CTGGTTATCT
GATGAAAACA GAATCATACT TGCCAGAAAG TGGCAGATAA ATCCAGAGTA G
 
Protein sequence
MKKVYFMFVI LLSLSGIHSA MAKPWQEIKE SKELRVGVPS DYAPLAFHNR QNKLIGFDID 
MAYSLGKALH LNILFVPSSW PTLSTDLAAD KFDIAMGGIT ETPGRRKQFA LSSPVLKNGK
IALTQCNRIN DFKSLEDIDR KGVRIVVNPG GTNQDYVDKH IRYADVIREK DNDATLQRIR
ERSADVMFTD LLEGNYYQNK EPGVFCVSTR SILPDTAGNK VYMMAKDNQY LLDAVNSWLS
DENRIILARK WQINPE