Gene SeSA_A0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0700 
Symbol 
ID6518873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp675254 
End bp675997 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content57% 
IMG OID642745841 
Productgifsy-1 prophage VmtV 
Protein accessionYP_002113664 
Protein GI194737744 
COG category[N] Cell motility 
COG ID[COG5492] Bacterial surface proteins containing Ig-like domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.431888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.00024084 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAACAC CAAACCCGCT GGTAAAAACG AAAGGCGCCG GAACCACATT CTGGCTGTAT 
ACCGGCAGCG GCGATGCGTT TAAAAATCCA CTGGCTGACG ATGACTGGCT GCGACTGGCA 
GGTATTAAGG ATCTGCAGCC CGGAGAAATG AGTGCAGATG CGGAAGACGA TGACTATCTT 
GATGATGAAA ATGCCGACTG GAAAAGCACT ACGCAGGGGC AGAAAAGCGT CGGTGACACC 
ACGGCCACGC TGGCCTGGAA ACCCGGTGAG ACCGGACAGA AAAAACTGGT TGAGCTGTTT 
GACACCGGCG AAGTTCGCGC CTTCCGTATC AGGTATCCTA ACGGGACGGT TGATGTGTTC 
CGCGGCTGGC TGAGTTCACT GGGTAAAACC GTGACGTCCA AAGAGGTGAT GACACGCAGC 
GTAAAAATCA CCGGCGTCGG GCGTCCTTCT CTTGCGGAGG AGGATACACC TGACGTAGTC 
AGCGTATCCG GCGTGACCGT TGCGCCGGCC AGTGCCACGG TGGCTGCCGG AGCCACCACC 
ACGCTGACAT TTACGGTAAA ACCTGATAAC GCGTCAGATA AAACGCTGCA GGTTGCGACC 
GCCGATCCGC TGATCGCCAC CGTCACGCTG AAGGATAATG TGGCCACGGT TAAAGGCGTG 
AAGGCGGGCA GCGTGAATAT TGTTGGCATC AGCAGTGACG GCAGTCTTGT CGCGGTGGCA 
GCAGTGACAG TGACGGCGTC ATAA
 
Protein sequence
MGTPNPLVKT KGAGTTFWLY TGSGDAFKNP LADDDWLRLA GIKDLQPGEM SADAEDDDYL 
DDENADWKST TQGQKSVGDT TATLAWKPGE TGQKKLVELF DTGEVRAFRI RYPNGTVDVF 
RGWLSSLGKT VTSKEVMTRS VKITGVGRPS LAEEDTPDVV SVSGVTVAPA SATVAAGATT 
TLTFTVKPDN ASDKTLQVAT ADPLIATVTL KDNVATVKGV KAGSVNIVGI SSDGSLVAVA 
AVTVTAS