Gene SeSA_A0621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0621 
Symbol 
ID6519403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp612203 
End bp614035 
Gene Length1833 bp 
Protein Length610 aa 
Translation table11 
GC content51% 
IMG OID642745765 
Productgp61 
Protein accessionYP_002113588 
Protein GI194738223 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.934548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.000000719384 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGCTCCTC ACCTGTTGCC AAACGGCAAG AAAGACGGGC ATGAATGGGT TGCTGGTAAC 
GTCAACGGCG ACAAGGGGAA CAGTCTGAAG GTTAACCTTA GCGGAAAGAA AAAATGGGCT 
GATTTCGCTG AGGGAGACGG CGGTGACATG CTTGATTTGT GGATGGCGTG TCGTGGAATT 
AACCTGCATC AGGCCATGCA GGAAGCGAAG GCATTTCTCG GCATCAGGGA GGACGATCAC 
CATTTCGACG CCAAACGTGA GAAGAGATTC TCCAGACCTG ACCGCAAGAA AATAGCCCGC 
TACGTTACCA GAACAGAATC ACATCTTGAG TACCTGCAAT CGCGTGGCAT ATCGCCTGAA 
GTCGCGAAGC GATACGAGGT TGTCAGCGGA AAGGTCTGGA ATGGCGAACG TGAACTGAGT 
GCCCTGGTGT TTCCGTACAA ACGCGATGGC GAGCTGCTGC AGGTCAAGCG AATCAGTACT 
GAACGTCCGG ACGGGAAGAA AGTCATCATG GCAGAAGGTG ACTGTGAACC CTGTCTGTTC 
GGATGGCAGG CTCTCGATGC TGGCGTGAGG GCGGTTGTGC TTTGCGAAGG CGAAATTGAT 
TGCATGAGCT ATGCACAATA CGGAATCCAG GCGCTATCTG TCCCGTTCGG TGGCGGGAAA 
GGCGCTAAAC AACAGTGGAT TGAGTTTGAA TACCATAACC TAGACAGGTT TGAGGAAATA 
TTCATTTCGA TGGATGTTGA TGATGTAGGT CGCGAAGCTG CAAGGGAAAT CGCAAGCCGA 
CTGGGTGAAC ATCGCTGTCG TCTGGTTACA CTGCCACACA AAGATATCAA CGAATGCCTG 
ATGAACGGCG TCACCGAGGA TGAAATCTGG CAGTACATCG GGACAGCGTC ATATTTCGAC 
CCCGAAGAGC TTTACAGCGC CCGTGAGTTT TATCATGACA CCATCAATGC TTTCTACGGC 
AAGCAGCAGT ATCTGTTTAA CCCACCGTGG GAAACGCTGG CTTACAACTT CCAGTTCCGT 
GAAGCTGAGT TGACTCTCGT TAATGGCGTT AATGGTCACG GAAAAACAGA GGTTGTCGGG 
CATATGGCGC TGGAGGCCAT GAGGCAGGGG GTAAAAACAT GCGTCGCATC GCTTGAACTG 
AAGCCCGGGA TTCTGCTCAA ACGCCTGACC CGGCAGTCTA CATGTTGCAA AATGCCGCCA 
GTTCTGGAAA TCGAATCAGC ATTTAAGTTT TACGATGACC GGCTATGGTT ATTTGGCCTG 
ACAGGTACAG CCAAGGCTGA ACGCCTGATT GAAATTTTCA CATACGCAAG ACGGCGATAC 
GGCATCCAGT TATTCATTAT CGACAGCCTC ATGAAATGCG GGATCGGTGA TGACGACTAC 
AACGGACAGA AAGCGTTTGT TGATGCGTTG TGCGATTTCA AAAACAAAAC CAATTCCCAC 
ATCATTCTCG TTACTCACTC AAGGAAAGGA GACAGCGAGG AGAAACCCAC CGGGAAAATG 
GACGTAAAAG GCTCAGGAGC GATTACAGAC CTCACAGATA ACCTGTTTAT CATCTGGCGC 
AATAAAGCTC GCGAGAGAGC GTTACAGCGC GTTCAGGCTG GCGAGCAAAT TAACGAGAAA 
GACCAGCAAC TTCTTGCTGC GCCCGCATCT GTTTTAATGC TTGAGAAGCA GCGAAACGGG 
GAAGGGTGGG AAGGCGGTGT GCCGTTATTT CTTGACGAGC AGTCTCACCA GTTCCTGCAA 
ATGGAAGGTG CGTCACCATA CAACTACATA GCTAACATGC CGAAGTCGGA GTATGACGAA 
GTGTGGAGGC AGGAGAATGT TACGGAGTAC TGA
 
Protein sequence
MAPHLLPNGK KDGHEWVAGN VNGDKGNSLK VNLSGKKKWA DFAEGDGGDM LDLWMACRGI 
NLHQAMQEAK AFLGIREDDH HFDAKREKRF SRPDRKKIAR YVTRTESHLE YLQSRGISPE 
VAKRYEVVSG KVWNGERELS ALVFPYKRDG ELLQVKRIST ERPDGKKVIM AEGDCEPCLF 
GWQALDAGVR AVVLCEGEID CMSYAQYGIQ ALSVPFGGGK GAKQQWIEFE YHNLDRFEEI 
FISMDVDDVG REAAREIASR LGEHRCRLVT LPHKDINECL MNGVTEDEIW QYIGTASYFD 
PEELYSAREF YHDTINAFYG KQQYLFNPPW ETLAYNFQFR EAELTLVNGV NGHGKTEVVG 
HMALEAMRQG VKTCVASLEL KPGILLKRLT RQSTCCKMPP VLEIESAFKF YDDRLWLFGL 
TGTAKAERLI EIFTYARRRY GIQLFIIDSL MKCGIGDDDY NGQKAFVDAL CDFKNKTNSH 
IILVTHSRKG DSEEKPTGKM DVKGSGAITD LTDNLFIIWR NKARERALQR VQAGEQINEK 
DQQLLAAPAS VLMLEKQRNG EGWEGGVPLF LDEQSHQFLQ MEGASPYNYI ANMPKSEYDE 
VWRQENVTEY