Gene SeSA_A0593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0593 
Symbol 
ID6519579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp596744 
End bp597262 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content54% 
IMG OID642745737 
Productputative fimbrial protein 
Protein accessionYP_002113561 
Protein GI194736416 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.394086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0160572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTTC GGCGCGTTTT CATCGCTATC GGTTGTGTTT TGTTCAGCCC GCTGAGTCAG 
GCCAACTCAT CTCTGGGCGA AGTGAATATT GAACTGCGCG GTAACGTGGT GGATTTTACC
TGCGCCGTGG TGGCGGGCGA CAGTAACAAG TCGGTTAATC TCGGCACCTG GCCGACAAAA
CAGCTTCACG CCGTCGGTGA CTCCACGCAA CCGGTAGCCT TTAGCCTAAA ACTTGAAGGT
TGCCCGCCGG GGTCGGCGTC TATAACGTTT TCCGGGACGC CAGCGCCCGG CACGGCATTA
CTGGCGCTTG CTGATACGGC AATGGCGCAA AAACTGGCGA TTGAAATTCG CGATGGCGAT
CAACGTCGAT TGCCACTTGA ACAGGCCAGC AAGGCCGTCG ATATTGACAA CAACGGCAAT
GCTACCCTGA AATTCTATGC GAACTATATC GCCTTAGCCG ATGGCGTGCA GCCCGGACTT
GCTAACGCGG ATGCGACTTT CCTGATCAAT TACAATTAA
 
Protein sequence
MILRRVFIAI GCVLFSPLSQ ANSSLGEVNI ELRGNVVDFT CAVVAGDSNK SVNLGTWPTK 
QLHAVGDSTQ PVAFSLKLEG CPPGSASITF SGTPAPGTAL LALADTAMAQ KLAIEIRDGD
QRRLPLEQAS KAVDIDNNGN ATLKFYANYI ALADGVQPGL ANADATFLIN YN