Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0593 |
Symbol | |
ID | 6519579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 596744 |
End bp | 597262 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642745737 |
Product | putative fimbrial protein |
Protein accession | YP_002113561 |
Protein GI | 194736416 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.394086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0160572 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCTTC GGCGCGTTTT CATCGCTATC GGTTGTGTTT TGTTCAGCCC GCTGAGTCAG GCCAACTCAT CTCTGGGCGA AGTGAATATT GAACTGCGCG GTAACGTGGT GGATTTTACC TGCGCCGTGG TGGCGGGCGA CAGTAACAAG TCGGTTAATC TCGGCACCTG GCCGACAAAA CAGCTTCACG CCGTCGGTGA CTCCACGCAA CCGGTAGCCT TTAGCCTAAA ACTTGAAGGT TGCCCGCCGG GGTCGGCGTC TATAACGTTT TCCGGGACGC CAGCGCCCGG CACGGCATTA CTGGCGCTTG CTGATACGGC AATGGCGCAA AAACTGGCGA TTGAAATTCG CGATGGCGAT CAACGTCGAT TGCCACTTGA ACAGGCCAGC AAGGCCGTCG ATATTGACAA CAACGGCAAT GCTACCCTGA AATTCTATGC GAACTATATC GCCTTAGCCG ATGGCGTGCA GCCCGGACTT GCTAACGCGG ATGCGACTTT CCTGATCAAT TACAATTAA
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Protein sequence | MILRRVFIAI GCVLFSPLSQ ANSSLGEVNI ELRGNVVDFT CAVVAGDSNK SVNLGTWPTK QLHAVGDSTQ PVAFSLKLEG CPPGSASITF SGTPAPGTAL LALADTAMAQ KLAIEIRDGD QRRLPLEQAS KAVDIDNNGN ATLKFYANYI ALADGVQPGL ANADATFLIN YN
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