| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0592 |
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| Symbol | |
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| ID | 6516500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 595727 |
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| End bp | 596734 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642745736 |
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| Product | mannose binding protein FimH |
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| Protein accession | YP_002113560 |
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| Protein GI | 194738098 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.267723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0333471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAT ACTCAGCGCT ATTGCTGGCG GGGACCGCGC TCTTTTTCAC CCATCCCGCG
CTGGCGACGG TTTGCCGCAA TTCAAACGGG ACGGCGACCG ATATCTTTTA CGACCTGTCA
GATGTTTTCA CCAGCGGCAA TAATCAGCCG GGACAGGTGG TTACGCTACC GGAAAAATCA
GGTTGGGTCG GCGTAAACGC GACGTGCCCG GCGGGGACAA CGGTGAATTA TACCTACCGA
AGCTATGTAT CAGAATTACC GGTACAAAGC ACCGAAGGAA ATTTTAAATA CCTCAAACTG
AATGACTACC TTCTGGGCGC GATGAGCATA ACCGATAGTG TCACTGGCGT ATTTTATCCG
CCCCGTAACT ATATTCGCAT GGGCGTCGAC TATAACGTGT CGCAGCAAAA GCCGTTTGGC
GTGCAGGACT CAAAGCTGGT TTTTAAATTA AAAGTGATAC GGCCTTTTAT TAATATGGTG
ACGATCCCTC GCCAGACAAT GTTTACCGTC TATGTGACGA CCTCTACCAG CGACGCGTTG
AGCACGCCGG TATATACCAT TAGCTACAGC GGCAAAGTGG AAGTGCCGCA AAACTGCGAA
GTGAATGCCG GACAGGTCGT GGAGTTTGAT TTCGGCGATA TCGGCGCGTC GTTATTTAGT
CAGGCGGGGG CGGGTAATCG TCCGCAAGGC GTCACGCCGC AAACGAAAAC TATCGCTATC
AAATGTACCA ACGTCGCGGC GCAGGCCTAT TTATCGATGC GGCTTGAAGC CGAAAAGGCC
TCAGGGCAGG CGATGGTGTC CGATAATCCG GATTTAGGTT TTGTAGTTGC TAATAGCAAC
GGTACGCCGC TCACACCCAA TAATTTGTCG AGTAAAATTC CGTTTCATCT TGATGATAAC
GCCGCCGCTC GCGTAGGTAT TCGCGCCTGG CCGATCAGCG TGACGGGGAA TAAACCGGCG
GAAGGGCCGT TTACTGCGCG CGGCTATCTA CGAGTCGATT ATGATTAA
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| Protein sequence | MKIYSALLLA GTALFFTHPA LATVCRNSNG TATDIFYDLS DVFTSGNNQP GQVVTLPEKS
GWVGVNATCP AGTTVNYTYR SYVSELPVQS TEGNFKYLKL NDYLLGAMSI TDSVTGVFYP
PRNYIRMGVD YNVSQQKPFG VQDSKLVFKL KVIRPFINMV TIPRQTMFTV YVTTSTSDAL
STPVYTISYS GKVEVPQNCE VNAGQVVEFD FGDIGASLFS QAGAGNRPQG VTPQTKTIAI
KCTNVAAQAY LSMRLEAEKA SGQAMVSDNP DLGFVVANSN GTPLTPNNLS SKIPFHLDDN
AAARVGIRAW PISVTGNKPA EGPFTARGYL RVDYD
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