| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0591 |
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| Symbol | |
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| ID | 6518626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 593100 |
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| End bp | 595712 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642745735 |
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| Product | outer membrane usher protein SfmD |
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| Protein accession | YP_002113559 |
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| Protein GI | 194735116 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.053453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA CAACCTGGTT TGCAGGGCGA TTTCCCGGCT ATGTATCACC GTTAAGCGGC
GTGGCGCTGT CGGTGTTGGC GGCGCTGTGT CCGCTGACGA GCCGCGGCGA AAGTTATTTC
AACCCTGCGT TTTTGTCGGC GGATACCGCG TCTGTGGCGG ATTTATCTCG CTTTGAAAAA
GGTAATCATC AGCCTCCCGG TATTTACCGG GTGGATATCT GGCGTAACGA CGAATTCGTA
GCGACGCAGG ATATCCGTTT TGAGGCGGGC GCCGTGGGCG CCGGCGATAA ATCCGGCGGC
CTGATGCCTT GTTTTACACC GGAGTGGATT AAACGCCTGG GCGTGAATAC CGCGGCGTTC
CCTGTCTCAG ATAAAGGCGT CGATACCACG TGTATTCACC TTCCTGAGAA AATCCCGGGC
GCGGAGGTCG CGTTCGATTT CGCGTCGATG CGCTTAAATA TTAGCTTGCC GCAGGCGTCA
TTGCTCAACA GCGCGCGTGG CTATATCCCG CCGGAAGAGT GGGATGAAGG GATACCCGCC
GCACTCATCA ATTACAGTTT TACCGGTAGC CGCGGAACAG ACAGCGATAG CTATTTTTTG
AGTCTGTTGA GTGGTTTGAA CTATGGCCCC TGGCGGCTGC GTAATAACGG AGCCTGGAAC
TATTCGAAAG GGGACGGCTA TCATTCGCAA CGCTGGAACA ACATTGGCAC CTGGGTACAG
CGCGCCATCA TTCCGCTAAA AAGCGAACTG GTCATAGGGG ACAGCAATAC CGGGAACGAT
GTTTTCGACA GCGTCGGCTT TCGCGGAGCG CGGCTGTACT CTTCTGACAA TATGTATCCC
GATAGCCTGC AGGGCTACGC CCCCACGGTT AGAGGAATCG CCCGGACGGC GGCAAAGCTG
ACGATACGAC AGAACGGGTA TGTTATCTAC CAAAGCTATG TGTCGCCGGG CGCGTTTGCG
ATTACCGATC TTAATCCTAC CTCTTCCAGC GGCGACCTTG AGGTGACGGT AGATGAAAAA
GACGGTAGCC AACAACGTTA CACGGTGCCT TACTCTACCG TTCCGCTATT GCAGCGTGAG
GGCAGGGTGA AGTATGACCT GGTGGCCGGG GATTTTCGCA GCGGCAATAG TCAGCAGTCT
TCGCCATTCT TTTTCCAGGG AACGGTGATT GCCGGCCTGC CTGCGGGGCT GACGGCTTAC
GGCGGTACGC AACTTGCCGA TCGTTACCGT GCCGTGGTGG TCGGGGCGGG GCGAAATTTG
GGCGACTGGG GAGCCGTGTC GGTCGATGTC ACACATGCGC GTAGCCAACT GGCAGATGAC
AGCACCCATC AGGGGCAATC GTTGCGTTTT CTGTACGCCA AATCGCTGAA TAATTACGGG
ACTAATTTTC AATTGCTGGG TTACCGCTAT TCCACGCGCG GATTTTACAC CCTGGATGAT
GTGGCATATC GCAGTATGGA AGGGTACGAC TACGAATACG ATAGCGACGG ACGCCGCCAT
AAAGTGCCGG TGGCGCAGAG CTACCACAAT CTCCGTTACA GCAAAAAAGG CCGCTTTCAG
GTCAATATTT CGCAAAACCT GGGGGATTAC GGGTCACTGT ATCTTTCCGG CAGTCAACAA
AATTACTGGA ATACGGCGGA TACCAATACC TGGTATCAAC TGGGATACGC CAGTGGATGG
CAAGGCATAA GTTATTCGCT GTCATGGTCG TGGAGCGAGT CGGTGGGGAT CTCAGGCGCC
GACCGCATTC TGGCATTCAA TATGTCCGTT CCGTTTAGCA TTCTGACCGG ACGGCGCTAT
GCGCGCGACA CTATTCTTGA TCGTACTTAT GCCACGTTTA ACGCCAACCG CAACCGCGAC
GGCGACAATA GCTGGCAGAC CGGCGTGGGC GGCACGCTTC TGGAAGGACG TAATCTGAGC
TACAGCGTGA CGCAGGGGCG TAGCAGTAGC AATGGTTATA GCGGCAGCGC CAGCGCTAGC
TGGCAGGCGA CGTATGGCAC GCTGGGCGTG GGATATAACT ACGATCGCGA TCAGCATGAC
TATAACTGGC AACTTTCCGG CGGCGTGGTT GGTCATGCGG ATGGTATTAC GTTTAGCCAA
CCGTTGGGCG ATACCAATGT CTTGATTAAA GCGCCGGGAG CGAAAGGCGT GCGCATCGAA
AACCAGACCG GCGTGAAAAC GGACTGGCGG GGCTATGCGG TAATGCCCTA CGCCACGGTA
TATCGCTATA ACCGCGTCGC ATTAGATACC AACACGATGG ACAACCATAC CGATGTCGAA
AATAACGTCA GCAGCGTAGT GCCGACAGAG GGCGCGCTGG TGCGGGCTGC TTTTGATACG
CGGATAGGCG TAAGGGCAAT CATTACCGCG AGGCTTGGCG GACGTCCGTT ACCGTTTGGC
GCGATAGTAC GAGAAACCGC CAGCGGCATT ACCAGTATGG TCGGCGATGA CGGGCAAATT
TATCTGAGCG GCTTGCCGCT AAAAGGTGAA CTGTTCATCC AGTGGGGAGA GGGGAAAAAC
GCGCGTTGTA TCGCCCCTTA CGCCCTGGCG GAGGATAGTC TGAAGCAGGC GATTACGATA
GCCAGCGCGA CCTGTATCCG TCCGGCGTCA TAA
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| Protein sequence | MKKTTWFAGR FPGYVSPLSG VALSVLAALC PLTSRGESYF NPAFLSADTA SVADLSRFEK
GNHQPPGIYR VDIWRNDEFV ATQDIRFEAG AVGAGDKSGG LMPCFTPEWI KRLGVNTAAF
PVSDKGVDTT CIHLPEKIPG AEVAFDFASM RLNISLPQAS LLNSARGYIP PEEWDEGIPA
ALINYSFTGS RGTDSDSYFL SLLSGLNYGP WRLRNNGAWN YSKGDGYHSQ RWNNIGTWVQ
RAIIPLKSEL VIGDSNTGND VFDSVGFRGA RLYSSDNMYP DSLQGYAPTV RGIARTAAKL
TIRQNGYVIY QSYVSPGAFA ITDLNPTSSS GDLEVTVDEK DGSQQRYTVP YSTVPLLQRE
GRVKYDLVAG DFRSGNSQQS SPFFFQGTVI AGLPAGLTAY GGTQLADRYR AVVVGAGRNL
GDWGAVSVDV THARSQLADD STHQGQSLRF LYAKSLNNYG TNFQLLGYRY STRGFYTLDD
VAYRSMEGYD YEYDSDGRRH KVPVAQSYHN LRYSKKGRFQ VNISQNLGDY GSLYLSGSQQ
NYWNTADTNT WYQLGYASGW QGISYSLSWS WSESVGISGA DRILAFNMSV PFSILTGRRY
ARDTILDRTY ATFNANRNRD GDNSWQTGVG GTLLEGRNLS YSVTQGRSSS NGYSGSASAS
WQATYGTLGV GYNYDRDQHD YNWQLSGGVV GHADGITFSQ PLGDTNVLIK APGAKGVRIE
NQTGVKTDWR GYAVMPYATV YRYNRVALDT NTMDNHTDVE NNVSSVVPTE GALVRAAFDT
RIGVRAIITA RLGGRPLPFG AIVRETASGI TSMVGDDGQI YLSGLPLKGE LFIQWGEGKN
ARCIAPYALA EDSLKQAITI ASATCIRPAS
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