Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0589 |
Symbol | |
ID | 6517359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 591839 |
End bp | 592333 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642745733 |
Product | fimbrial protein internal segment |
Protein accession | YP_002113557 |
Protein GI | 194734453 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0147243 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCCCG TTATTGCGCA GCCGGTAATG GTGGAGAGCG GGCGTATTCA CCTGCGCGGA CAACTGGTCA ATGGCGGCTG CGCTGTCGCC ACTGAAAGCC AGGATTTGCG CGTACTGATG GGACAGTACC GCACGAATGC GTTTACCGGT CCTGGCAGCT TCGCTCCCGT CAGCGTTCCA TTTTCGTTAC GGTTAATCTC TTGTAGCGCG GAGGTCTGGC GTCATGTCGG CATTGCGTTT GCCGGCGTTA CGCCTGCGGA AGATCCCCAT GTTTTTCTGG CCAGCGGCGA GGGTATCGGT AATGCCGGAA TCGGCCTGGC ATTATTTGAT GACCAGCAGC GGCAAATCAT ACCTAACACG TTACCGCTTC ATTACACGCC CATTTTAACG TCAGAAATGA CTTTGCATTT TACTGCCCGC TATCGGGCAA TTTCAGAAAA TATGACGCCG GGACGAATTC ATTCAGAAGT GTGGTTTACG CTGGTTTACC CATGA
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Protein sequence | MSPVIAQPVM VESGRIHLRG QLVNGGCAVA TESQDLRVLM GQYRTNAFTG PGSFAPVSVP FSLRLISCSA EVWRHVGIAF AGVTPAEDPH VFLASGEGIG NAGIGLALFD DQQRQIIPNT LPLHYTPILT SEMTLHFTAR YRAISENMTP GRIHSEVWFT LVYP
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