| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0577 |
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| Symbol | ybbB |
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| ID | 6516174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | - |
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| Start bp | 581924 |
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| End bp | 583009 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642745721 |
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| Product | tRNA 2-selenouridine synthase |
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| Protein accession | YP_002113545 |
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| Protein GI | 194734279 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2603] Predicted ATPase |
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| TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.370483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATG GAACGGACTA TCGCGCGCTC CTCCTTGCCG ATACGCCTTT AATTGATGTA
CGCGCGCCGA TTGAGTTTGA ACAGGGCGCC ATGCCGGGCG CCATCAACCT GCCATTGATG
ATGGACGACG AGCGAGCCGC CGTCGGCACC TGCTACAAAC GTCAGGGCGC GGATGCGGCG
TTAGCGTTGG GGCATCGGCT GGTTTGCGGC GACATTCGCC AGCAGCGGCT TGAGGCCTGG
AAAGCCGCGT ATCAACGTTT CCCCAATGGG TATCTGTGCT GCGCGCGCGG CGGTCAGCGG
TCACATATCG TACAACGTTG GCTGCAAGAA ACAGGGATTG ACTGCCCGCT TATTGAAGGC
GGCTATAAAG CGCTGCGCCA GACAGCAATT CAGGCGACCT GGCAACTGGC GCAAAAACCG
ATACTTTTAA TTGGCGGCTG TACGGGCAGC GGCAAAACGC AACTGGTGCG ACAACAGCCC
AACGGCGTGG ATCTGGAAGG TCTCGCGCGT CATCGCGGCT CCTCTTTTGG CCGCACGCTG
AAACCCCAAC TCAGCCAGGC CAGTTTTGAA AACAAACTTG CCGTTGAATT GCTGAAAATT
AACGCGCGTC AGACGCTAAA AAGGTGGGTA CTGGAAGATG AAGGGCGAAC GATCGGCGCC
AACCATCTGC CTGAGTGTTT ACGCGAAAGA ATGGTGCAGG CCCCTATTGC GGTAGTGGAA
GATCCGTTTT CGCTTCGTCT GGAACGACTG CGTGAAGAGT ATTTCATCCG TATGCATCAC
GACTTCACCC ACGCCTACGG CGATGAAGCC GGTTGGCAGG CGTATAGTGA ATATCTTCAT
CATGGACTGT TCGCTATTCG CCGCCGTCTG GGGTTGCAAC GCTTTGCCGA ACTGACGGAC
ACGCTGGATA GGGCGCTGGC GGAGCAATTA TCCAGCGGCA GCACCGACGG CCATATGGCA
TGGCTGGTTC CGCTACTTAA CGAATATTAC GACCCAATGT ATCGCTATCA ACTGGAGAAA
AAAGCCGCGA ATATCGTTTT TCGCGGCACA TGGCAAGACG TTGCCAACTG GCTAAAAGCG
CAATAG
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| Protein sequence | MNDGTDYRAL LLADTPLIDV RAPIEFEQGA MPGAINLPLM MDDERAAVGT CYKRQGADAA
LALGHRLVCG DIRQQRLEAW KAAYQRFPNG YLCCARGGQR SHIVQRWLQE TGIDCPLIEG
GYKALRQTAI QATWQLAQKP ILLIGGCTGS GKTQLVRQQP NGVDLEGLAR HRGSSFGRTL
KPQLSQASFE NKLAVELLKI NARQTLKRWV LEDEGRTIGA NHLPECLRER MVQAPIAVVE
DPFSLRLERL REEYFIRMHH DFTHAYGDEA GWQAYSEYLH HGLFAIRRRL GLQRFAELTD
TLDRALAEQL SSGSTDGHMA WLVPLLNEYY DPMYRYQLEK KAANIVFRGT WQDVANWLKA
Q
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