Gene SeSA_A0573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0573 
Symbol 
ID6518410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp577960 
End bp579093 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content50% 
IMG OID642745717 
Productouter membrane protein 
Protein accessionYP_002113541 
Protein GI194736202 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.666146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATTA AAATAACAGC GTTGGCGGCA TCGATCGGCG CGGCAGTGGC TTTCATGCCT 
TTCGCTACTC AGGCGGAAAT CACCGTTTTA AAACAAGATC CCCAGGCGGG TAATCCACTC 
AGCCGACTCA ATTTCACCGT TGGCGGGAGT ATTCGTCCGC AGTTCCAGAA TATGACCGGC 
AATGACGGCG CGAACGGTTA TAAACGTAAT GGTTTTGATG GCGGGACGCG TTTCCGCTTC 
GCCGCGGATT ATTATCTGTT TGATGATATC AGTTGGATTA GCTATTACGA GCTGGGCGTC 
AATATCCCTG CGGTATTTGA CTGGGATAAC CATTATGCGA AGGGCGCGAC TGATACCACT 
CGCCGTATGC TGTATACCGG CTTCAAGAGC GCGACGTGGG GAACGCTGAC CTTCGGTCAA 
CAGAACAGCA TTTATTACGA TGTGGTGGGC GCAAAAACCG ATATCTGGGA TTACGACATG 
ATAGGTCAGG CGCCGGGCAA CGGGATTAAC GGCGACTACG ATGGTTCTTA TCGCACGCGT 
AAGTCATTGA AGTATAAGAA AAGCATTGGC AATGTCGATC TCTACGCATC TTATCTGTTC 
AGCGACGATT ATAATGCCAA TAACGGCCTG AATTACAAAC GTAAAGGCGG CGGTTCTTTA 
GGCGCGGATT ACCATCTCAC CGACGATCTG ACCTGGGGGA CGGCATGGAA CTATACCCGT 
GCGGAGATGC GCGGCAACGG TAATAAAACT TACGATCAAA ATATTGTCGG TACCGCGTTA 
AGCTGGACGC CGGAAAACTG GACTATTGCC GCAGGCGGCG GTTGGTATCA GAACTTTATG 
ACGACCAAAA AAGTATCTGT GAATGATTAC TTTGCCGGCG ATGCGTGGGG TCTGGAATAT 
TTTGTCGGTT ACGCTTTCCC GATTGGTCAG TATGCCGTGA AAGCTATTCA ACCGTACTTT 
ATGGGCGACC GCATTGAATA TGTGAATGGC CGCGACTATC TGCGCACCGA TAACGGCGTG 
GGGATCACCT TCCAACTGGA TTATGGTTTC CGCGTTGATT ATGAACATGT TTTCACCTCC 
AGCACTGACA ATCTGGGCGA TATGAACCTG GTGCGTCTGC GTTACGATTT CTAA
 
Protein sequence
MTIKITALAA SIGAAVAFMP FATQAEITVL KQDPQAGNPL SRLNFTVGGS IRPQFQNMTG 
NDGANGYKRN GFDGGTRFRF AADYYLFDDI SWISYYELGV NIPAVFDWDN HYAKGATDTT 
RRMLYTGFKS ATWGTLTFGQ QNSIYYDVVG AKTDIWDYDM IGQAPGNGIN GDYDGSYRTR 
KSLKYKKSIG NVDLYASYLF SDDYNANNGL NYKRKGGGSL GADYHLTDDL TWGTAWNYTR 
AEMRGNGNKT YDQNIVGTAL SWTPENWTIA AGGGWYQNFM TTKKVSVNDY FAGDAWGLEY 
FVGYAFPIGQ YAVKAIQPYF MGDRIEYVNG RDYLRTDNGV GITFQLDYGF RVDYEHVFTS 
STDNLGDMNL VRLRYDF