| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0569 |
|---|
| Symbol | |
|---|
| ID | 6516367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 573167 |
|---|
| End bp | 573937 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642745713 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_002113537 |
|---|
| Protein GI | 194734331 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAT CGGTCTTAAT AACAGGATGT TCCAGCGGAA TCGGTCTGGA CAGCGCGCTT
GAACTTAAAC GCCAGGGCTT TCAAATCCTG GCGGGCTGCC GCAAACCTGA TGATGTCGCC
CGGATGAACA GTATGGGATT TACCGGCGTG TTGATCGATC TCGACTCCCC TGAAAGCGTG
GATCGTGCCG CCGATGAAGT GATCGCCCTG ACCGATAATC GTCTGTATGG GATCTTTAAC
AATGCCGGCT ACGGCGTGTA TGGCCCCCTT TCTACCATCA GCCGTGAGCA GATGGAGCAA
CAGTTTTCCA GTAATTTTTT CGGCGCGCAT CAGCTTACCA TGCGCTTACT TCCCGCCATG
TTGCCGCATG GCGAAGGACG CATTGTGATG ACCTCATCGG TGATGGGGCT GATTTCCACC
CCAGGGCGCG GCGCTTACGC CGCCAGCAAA TATGCGCTCG AAGCCTGGTC TGACGCGCTA
CGTATGGAGC TACGGCACAC AGGCATTAAA GTGAGTCTGA TAGAACCGGG ACCAATTCGT
ACCCGTTTTA CGGATAACGT TAACCAGACG CAGCGTGATA AACCGGTAGA AAATCCCGGC
ATCGCCGCAC GTTTCACCCG CGATCCTGAC GCGGTAGTAG CGAAAGTGCG TCATGCTTTT
GCAAGCGATA AACCCAGGCT GCGCTATCCC GTTACGCTGG TCACCTGGGC AGTGATGGCG
CTGAAACGCC TATTGCCGGG CCGGATGCTG GATAAAATTT TACAAAGCTG A
|
|---|
| Protein sequence | MQKSVLITGC SSGIGLDSAL ELKRQGFQIL AGCRKPDDVA RMNSMGFTGV LIDLDSPESV
DRAADEVIAL TDNRLYGIFN NAGYGVYGPL STISREQMEQ QFSSNFFGAH QLTMRLLPAM
LPHGEGRIVM TSSVMGLIST PGRGAYAASK YALEAWSDAL RMELRHTGIK VSLIEPGPIR
TRFTDNVNQT QRDKPVENPG IAARFTRDPD AVVAKVRHAF ASDKPRLRYP VTLVTWAVMA
LKRLLPGRML DKILQS
|
|---|
| |