Gene SeSA_A0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0539 
Symbol 
ID6517699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp546059 
End bp546994 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content53% 
IMG OID642745686 
Producthypothetical protein 
Protein accessionYP_002113510 
Protein GI194735651 
COG category[S] Function unknown 
COG ID[COG5464] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGTC TACCCACCAC GCCGCACGAT GCGGTATTTC GACAGATGCT GATGCAAAAA 
GAGGTCGCCC GCGACTTTCT GGCTATCCAC TTGCCAGAAG ACTTTCTTGC AATCTGCGAT
CTGGATTCAC TGAAGCTGGA GTCAGGGAGT TTTGTTGAAG ACAATTTACG CAGCCGCTAT
TCAGATATCC TCTACTCTCT GCATACCCAA CACGGCCCCG GGTATGTTTA CGCGCTCATT
GAACATCAGA GCAAATCAGA CCGGCTGATG GCTTTTCGCC TGATGCGTTA CGCCATTGCC
GCCATGCAGC GTCATCTGGA TGCCGGTCAT GATACCTTGC CGCTGGTGGT GCCAATCCTC
TTTTATCACG GTCCGGAAAG CCCGTGGCCC TATAGCCTTA ACTGGCATAA TATGTTTGTG
AAACCGGATA TGGCGAAGGC CTTATACAGC TGCGAATTTG CGCTGGTCGA CCTGACGATA
ATGCCGGATA ATCAGCTTTT GCAGCATCGG CGGATAGCGA TGTTAGAGCT CCTGCAAAAA
CATATTCGTC AACGCGATTT AAGCGAACTG CTCGACCCCC TTATCACGCT TTTAACGCAG
GATCATTTGA CGGACACGCA GCTCAGTGTG CTGATCAACT ATATGTTGAA AGCAGGAAAC
GCCGCAGAAC CCGGGGCGCT GATTCGTCAA CTGGCGCAGG GCGCGCCGCA GTATAAGGAA
CAACTGATGA CAATAGCGGA ATGGCTGGAA GAAAAAGGCC GAACGGAAGG GTTGCAAAAA
GGCCTGCAAA AAGGGCTTGA GCAAGGTTTA GCACAAGGCC GTGAGGCCGA AGCGCGCGCT
ATTGCCCGCA AAATGCTTGC CAACGGGCTG GAACCCGGGC TCATCGCCAG CGTCACCGGC
ATTACGCCGG AAGAGCTTTC TACGCTTTCG CATTAG
 
Protein sequence
MERLPTTPHD AVFRQMLMQK EVARDFLAIH LPEDFLAICD LDSLKLESGS FVEDNLRSRY 
SDILYSLHTQ HGPGYVYALI EHQSKSDRLM AFRLMRYAIA AMQRHLDAGH DTLPLVVPIL
FYHGPESPWP YSLNWHNMFV KPDMAKALYS CEFALVDLTI MPDNQLLQHR RIAMLELLQK
HIRQRDLSEL LDPLITLLTQ DHLTDTQLSV LINYMLKAGN AAEPGALIRQ LAQGAPQYKE
QLMTIAEWLE EKGRTEGLQK GLQKGLEQGL AQGREAEARA IARKMLANGL EPGLIASVTG
ITPEELSTLS H