Gene SeSA_A0496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0496 
Symbol 
ID6516004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp499894 
End bp501258 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content55% 
IMG OID642745645 
Productinner membrane transport protein YajR 
Protein accessionYP_002113469 
Protein GI194734000 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATT ATAAAATGAC GCCAGGGGAG CTGCGTGCCA CATGGGGTTT AGGGACCGTC 
TTTTCGTTGC GTATGCTGGG CATGTTTATG GTTCTACCGG TACTGACCAC ATACGGTATG
GCGCTACAGG GCGCCAGCGA AGCATTAATC GGCATTGCGA TCGGCATTTA CGGGCTGGCG
CAGGCTATCT TTCAAATTCC CTTTGGGCTG CTGTCCGACC GCATTGGCCG TAAGCCGCTG
ATTGTCGGCG GACTGGCGGT ATTTGTCGCG GGCAGCGTCA TTGCCGCGCT CTCCCACTCA
ATCTGGGGCA TTATTCTGGG GCGAGCGCTA CAGGGGTCCG GCGCTATTGC CGCCGCCGTC
ATGGCGCTCC TGTCTGACCT GACCCGCGAG CAAAACCGTA CCAAAGCGAT GGCGTTTATC
GGCGTCAGCT TTGGTATCAC CTTCGCGATT GCGATGGTAT TAGGGCCGAT TGTTACCCAT
AGTCTGGGAT TGAACGCGTT GTTCTGGATG ATCGCCGCCC TCGCCACCCT GGGCATTCTT
CTGACGATCT GGGTGGTTCC CAACAGTACC AACCATGTGC TGAATCGCGA ATCCGGGATG
GTCAAAGGCA GCTTCAGTAA AGTGCTAGCG GAGCCGAGGC TGCTCAAGCT CAATTTCGGC
ATTATGTGTC TGCATATTTT ATTGATGTCC ACCTTTGTCG CCCTGCCCGG CCAGCTTGCC
GATGCCGGTT TTCCTGCCGC CGAACACTGG AAGGTGTATC TGGCAACCAT GGTGATCGCC
TTTGCCGCCG TCGTGCCTTT TATTATCTAT GCTGAAGTCA AACGGCGGAT GAAGCAGGTA
TTCCTGTTCT GCGTGGGGCT CATTATCGTC GCGGAAATCG TGTTGTGGGG AGTGGGCCAG
CATTTCTGGG AGCTGGTGAT TGGCGTACAA CTCTTTTTCC TCGCCTTTAA TCTGATGGAG
GCGCTGCTGC CTTCGCTGAT TAGCAAAGAG TCGCCCGCGG GGTATAAAGG AACGGCGATG
GGCGTCTATT CTACCAGTCA GTTTCTTGGC GTGGCGCTTG GCGGCTCGCT GGGCGGCTGG
ATAGACGGCA CGTTTGATGG GCAAACCGTT TTTCTTGCCG GGGCCGTACT GGCGATGGTA
TGGCTGGCGG TGGCAAGTAC CATGAAAGAG CCGCCCTATG TCAGCAGCCT GCGTGTGGAA
ATTCCAGCGG ATATCGTTGC TGACGACAGG CTAAAACAGC GACTGTTGGC AATGAAAGGC
GTAAGCGAAG CGCTGATCGT GGCGGAAGAG CATTCCGCTT ACGTCAAAAT CGACAGCAAA
GTGACCAATC GCTTTGAAGT TGAACAGCTT ATCAGCAAAG GATGA
 
Protein sequence
MNDYKMTPGE LRATWGLGTV FSLRMLGMFM VLPVLTTYGM ALQGASEALI GIAIGIYGLA 
QAIFQIPFGL LSDRIGRKPL IVGGLAVFVA GSVIAALSHS IWGIILGRAL QGSGAIAAAV
MALLSDLTRE QNRTKAMAFI GVSFGITFAI AMVLGPIVTH SLGLNALFWM IAALATLGIL
LTIWVVPNST NHVLNRESGM VKGSFSKVLA EPRLLKLNFG IMCLHILLMS TFVALPGQLA
DAGFPAAEHW KVYLATMVIA FAAVVPFIIY AEVKRRMKQV FLFCVGLIIV AEIVLWGVGQ
HFWELVIGVQ LFFLAFNLME ALLPSLISKE SPAGYKGTAM GVYSTSQFLG VALGGSLGGW
IDGTFDGQTV FLAGAVLAMV WLAVASTMKE PPYVSSLRVE IPADIVADDR LKQRLLAMKG
VSEALIVAEE HSAYVKIDSK VTNRFEVEQL ISKG