Gene SeSA_A0483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0483 
SymbolispA 
ID6519784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp488055 
End bp488954 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content58% 
IMG OID642745632 
Productgeranyltranstransferase 
Protein accessionYP_002113456 
Protein GI194737792 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.351097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTTA CGCAGCAGCT ACAGGCTTGC GTAACGCAAG CGAATCAGGC GCTGAGCCGT 
TTTATCGCGC CACTGCCCTT TCAGAACACT CCCGTGGTCG AAGCCATGCA GTATGGCGCA 
TTATTAGGCG GTAAACGCCT GCGGCCATTT CTGGTTTACG CCACCGGTCA AATGTTTGGC 
GTCAGTACGG CAACGCTGGA TGCGCCAGCT GCGGCGGTCG AATGCATTCA TGCCTATTCG 
CTGATCCATG ACGACCTGCC AGCAATGGAC GATGACGATT TGCGTCGCGG CCTGCCGACT 
TGCCATATTA AATTTGGCGA AGCCAACGCA ATCCTGGCGG GAGACGCGTT GCAAACGCTG 
GCGTTTGCCA TTATCAGCGA CGCGCCGATG CCGGAAGTCG CCGATCGCGA TCGTATCGCG 
ATGATCGCCG AACTGGCGAA CGCCAGCGGC ATCGCCGGTA TGTGCGGCGG TCAGGCATTG 
GATCTGGCGG CAGAAGGCCA GCGGATCACT CTGGACGCGC TGGAACGCAT TCATCGCCAT 
AAGACCGGCG CGCTCATTCG CGCCGCCGTT AGACTTGGCG CGTTGAGCGC GGGCGATAAA 
GGACGGAATA CTCTGCCGAT ACTTGACCGC TATGCAGAGA GTATCGGCCT TGCCTTCCAG 
GTTCAGGATG ACATTCTGGA TGTGGTGGGC GATACTGCAA CGTTAGGTAA ACGTCAGGGC 
GCAGACCAGC AGCTTGGCAA AAGTACCTAC CCTGCACTTC TGGGTCTTGA GCAAGCCCGG 
AATAAAGCCC GGGACCTGAT AGAGGACGCC CGTCAGTCGT TACATCAGCT GGCCGCGCAA 
TCACTGGACA CCTCGGCACT GGAAGCGCTA GCGAACTACA TAATCCAGCG TGATAAATAA
 
Protein sequence
MDFTQQLQAC VTQANQALSR FIAPLPFQNT PVVEAMQYGA LLGGKRLRPF LVYATGQMFG 
VSTATLDAPA AAVECIHAYS LIHDDLPAMD DDDLRRGLPT CHIKFGEANA ILAGDALQTL 
AFAIISDAPM PEVADRDRIA MIAELANASG IAGMCGGQAL DLAAEGQRIT LDALERIHRH 
KTGALIRAAV RLGALSAGDK GRNTLPILDR YAESIGLAFQ VQDDILDVVG DTATLGKRQG 
ADQQLGKSTY PALLGLEQAR NKARDLIEDA RQSLHQLAAQ SLDTSALEAL ANYIIQRDK