Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0464 |
Symbol | tgt |
ID | 6515999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 473667 |
End bp | 474794 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642745614 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_002113438 |
Protein GI | 194736894 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.992026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTG AGTTAGATAC CACCGATGGT CGCGCGCGTC GCGGTCGTCT GGTGTTTGAT CGTGGCGTAG TGGAAACGCC TGCTTTTATG CCTGTGGGTA CTTACGGTAC GGTAAAAGGC ATGACGCCGG AAGAAGTGGA AGCGACCGGC GCGCAGATTA TTCTCGGCAA CACTTTCCAC CTGTGGCTGC GCCCGGGTCA GGAAATCATG AAGCTGCATG GCGATCTGCA CGATTTTATG CAGTGGAAAG GGCCGATTCT CACCGATTCC GGCGGCTTCC AGGTTTTCAG CCTCGGCGAT ATTCGTAAGA TTACCGAGCA AGGTGTGCAC TTCCGTAACC CGATCAACGG CGATCCGATT TTCCTCGATC CGGAAAAGTC GATGGAGATC CAGTACGATC TCGGTTCCGA TATCGTGATG ATCTTTGATG AATGTACGCC GTACCCGGCA GACTGGGACT ATGCTAAACG CTCGATGGAG ATGTCATTGC GTTGGGCAAA GCGTAGCCGC GACCGTTTTG ATAGCCTTGG CAATAAGAAT GCGCTTTTTG GCATCATTCA GGGCAGCGTT TACGAAGATT TACGCGATAT CTCGGTGAAA GGTCTGGTAG AGATTGGCTT TGATGGCTAC GCTGTCGGCG GTTTGGCTGT CGGTGAGCCG AAAGCAGATA TGCACCGCAT TCTGGAGCAC GTTTGCCCGC AGATCCCGGC TGACAAACCG CGTTACCTGA TGGGCGTGGG TAAACCGGAA GATCTGGTGG AAGGGGTGCG TCGCGGTATT GATATGTTTG ACTGTGTCAT GCCAACGCGA AATGCCCGTA ATGGTCATCT GTTTGTGACC GACGGCGTGG TGAAGATTCG TAATGCAAAG CATAAAAGCG ACACCAGCCC GCTTGACGCC GAGTGCGATT GCTACACCTG TCGCAATTAT TCACGCGCTT ACTTGCATCA TCTCGACCGT TGCAACGAAA TATTAGGTGC GCGTCTCAAT ACCATTCATA ACTTGCGTTA CTACCAGCGT TTGATGGCGG GTTTACGCAA GGCTATTGAA GAGGGTAAAT TAGAGAGCTT CGTAACCGAG TTTTACCAAC GTCAGGGGCG ACCCGTTCCA CCTTTGAACG TTGATTAA
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Protein sequence | MKFELDTTDG RARRGRLVFD RGVVETPAFM PVGTYGTVKG MTPEEVEATG AQIILGNTFH LWLRPGQEIM KLHGDLHDFM QWKGPILTDS GGFQVFSLGD IRKITEQGVH FRNPINGDPI FLDPEKSMEI QYDLGSDIVM IFDECTPYPA DWDYAKRSME MSLRWAKRSR DRFDSLGNKN ALFGIIQGSV YEDLRDISVK GLVEIGFDGY AVGGLAVGEP KADMHRILEH VCPQIPADKP RYLMGVGKPE DLVEGVRRGI DMFDCVMPTR NARNGHLFVT DGVVKIRNAK HKSDTSPLDA ECDCYTCRNY SRAYLHHLDR CNEILGARLN TIHNLRYYQR LMAGLRKAIE EGKLESFVTE FYQRQGRPVP PLNVD
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