Gene SeSA_A0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0452 
Symbol 
ID6516748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp462224 
End bp463426 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content57% 
IMG OID642745603 
Productexonuclease subunit SbcD 
Protein accessionYP_002113427 
Protein GI194734879 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID[TIGR00619] exonuclease SbcD 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCC TCCACACCTC TGACTGGCAT CTGGGACAAA ATTTCTACAG TAAAAGCCGC 
GCCGCGGAGC ATCAGGCTTT TCTGGACTGG CTGCTGGAGA CCGCGCAGGC CCATCAGGTG 
GATGCCATTA TTGTCGCTGG CGATATTTTT GATACCGGTT CGCCGCCAAG CTATGCCCGA 
GAACTTTATA ACCGTTTCGT CGTTAATTTA CAGCAAACGG GCTGTCATCT GGTGGTGCTG 
GCCGGTAATC ATGATTCCGT CGCCACGCTA AACGAGTCGC GCGACATTCT GGCGTTTCTC 
AATACAACCG TGATCGCCAG CGCGGGCTAT GCGCCGCAGC TACTTCATCG TCGCGACGGT 
TCTCCAGGCG CCGTACTGTG CCCCATTCCC TTTTTGCGCC CGCGCGACAT TCTTACCAGT 
CAGGCGGGAT TATCCGGCAG CGAGAAACAG CAGCAACTTC TTCATGCGAT TGCCGATTAT 
TATCAACAGC AATATCGGGA AGCGTGCCAG CTACGCGGCG AACGAAAGCT GCCGGTTATC 
GCGACGGGGC ATTTAACCAC CGTCGGCGCC AGCAAAAGCG ATGCGGTTCG CGACATTTAT 
ATCGGTACGC TGGATGCCTT TCCGGCGCAG CATTTCCCCC CAGCGGATTA TATCGCATTG 
GGACACATTC ACCGCGCGCA ATGTGTCGGC GGCACAGAGC ATATCCGCTA TTGCGGCTCA 
CCCATCGCCC TCAGCTTTGA TGAGTGCGGC AAAAGCAAAT GCGTGCATCT GGTGACCTTC 
GAGCAGGGGA AATGGCAAAG TACCGAAAGT CTGGCTGTCC CCGTGACTCA ACCGCTGGCG 
GTTTTAAAAG GCGACCTGGC GTCAATTACC GAACAGCTTG AGCAGTGGCG CGGCGTGGAG 
CAATCACCCC CCGTCTGGCT GGATATTGAA ATCACCACCG ATGATTATCT GCACGATATC 
CAACGCAGAA TACAGACGCT AACGGAGTCG CTACCCGTAG AGGTATTACT GGTGCGCCGT 
AGCCGCGAAC AGCGCGAGCG CTCGCTGGCG AACGAGCGGC GGGAAACATT AAGCGAGCTT 
AGCGTGGAGG AGGTTTTTGC GCGGCGTCTG GCGCTGGAAG CGTTAGATCC CCCGCAGCGC 
GAGCGCCTGA ATCAGCTCTT TTCCAGCACG CTCTACGCGT TGAATGAGGA GCATGAGGCA 
TGA
 
Protein sequence
MRILHTSDWH LGQNFYSKSR AAEHQAFLDW LLETAQAHQV DAIIVAGDIF DTGSPPSYAR 
ELYNRFVVNL QQTGCHLVVL AGNHDSVATL NESRDILAFL NTTVIASAGY APQLLHRRDG 
SPGAVLCPIP FLRPRDILTS QAGLSGSEKQ QQLLHAIADY YQQQYREACQ LRGERKLPVI 
ATGHLTTVGA SKSDAVRDIY IGTLDAFPAQ HFPPADYIAL GHIHRAQCVG GTEHIRYCGS 
PIALSFDECG KSKCVHLVTF EQGKWQSTES LAVPVTQPLA VLKGDLASIT EQLEQWRGVE 
QSPPVWLDIE ITTDDYLHDI QRRIQTLTES LPVEVLLVRR SREQRERSLA NERRETLSEL 
SVEEVFARRL ALEALDPPQR ERLNQLFSST LYALNEEHEA