Gene SeSA_A0450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0450 
Symbol 
ID6517836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp457742 
End bp458968 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content56% 
IMG OID642745601 
ProductMFS transport protein AraJ 
Protein accessionYP_002113425 
Protein GI194734130 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAATTC ACAGCCACAG CGCGCAACAT GCGCCTTTAT TTTCGGCAGG TGGTATGAAA 
AAAGTTATTT TTTCTTTGGC GCTGGGTACG TTCGGACTGG GGATGGCCGA GTTTGGCATT
ATGGGCGTGC TGACGGAGCT GGCACGCGAT GTCGGGATAA CGATTCCCGC CGCCGGGCAT
ATGATCTCGT TTTACGCCTT CGGCGTCGTG CTGGGCGCGC CTGTTATGGC GCTCTTTTCC
AGCCGCTTTT CGCTTAAACA TATACTGCTG TTTCTGGTCA CGCTGTGCGT GATGGGCAAT
GCCATATTTA CCTTTTCCTC GTCATATCTG ATGCTCGCCG TCGGCAGACT GGTTTCCGGC
TTTCCGCACG GCGCCTTTTT TGGCGTCGGC GCCATTGTCC TGTCAAAGAT TATCCGCCCC
GGGAAAGTCA CCGCCGCCGT CGCGGGTATG GTTTCAGGAA TGACGGTGGC GAATCTGGTG
GGCATTCCGG TCGGCACTTA CCTGAGCCAG GAATTTAGCT GGCGCTACAC CTTTTTATTG
ATCGCGGTTT TCAACATCGC TGTGCTCACC GCAATTTTCT TCTGGGTGCC GGATATCCGT
GACAAAGCCC AAGGCAGCCT GCGCGAGCAG TTCCACTTCT TGCGTAGTCC TGCACCGTGG
CTCATTTTCG CCGCCACGAT GTTCGGCAAT GCGGGCGTTT TTGCCTGGTT CAGCTATATC
AAGCCATTTA TGATGTACAT CTCCGGTTTT TCGGAGACGA GCATGACGTT TATTATGATG
CTGGTCGGGC TGGGGATGGT GTTAGGCAAT CTGTTAAGCG GCAAACTCTC CGGCAGATAT
ACTCCGCTGC GCATCGCGGT AGTGACTGAC CTCATTATCG TGCTCTCTCT CATGGCGCTC
TTTTTCTTCA GCGGATACAA AACGGCATCG CTGACTTTCG CGTTTATCTG CTGCGCTGGT
CTGTTTGCGC TCTCTGCGCC GCTGCAAATC CTGCTGCTGC AAAACGCCAA AGGCGGCGAA
CTGCTGGGCG CGGCGGGAGG GCAAATCGCC TTTAATCTCG GTAGCGCGAT TGGCGCCTGG
TGCGGCGGAC TGATGCTGAC GCTAGGTTTT GCGTACCACT ACGTGGCGCT TCCCGCCGCC
CTGCTCTCGT TTTCCGCCAT GTCGTCGTTG CTGGTATACG GACGTCTAAA ACACAAGCAG
CCATCGGTCA CGCCGGTTGC CGGATGA
 
Protein sequence
MTIHSHSAQH APLFSAGGMK KVIFSLALGT FGLGMAEFGI MGVLTELARD VGITIPAAGH 
MISFYAFGVV LGAPVMALFS SRFSLKHILL FLVTLCVMGN AIFTFSSSYL MLAVGRLVSG
FPHGAFFGVG AIVLSKIIRP GKVTAAVAGM VSGMTVANLV GIPVGTYLSQ EFSWRYTFLL
IAVFNIAVLT AIFFWVPDIR DKAQGSLREQ FHFLRSPAPW LIFAATMFGN AGVFAWFSYI
KPFMMYISGF SETSMTFIMM LVGLGMVLGN LLSGKLSGRY TPLRIAVVTD LIIVLSLMAL
FFFSGYKTAS LTFAFICCAG LFALSAPLQI LLLQNAKGGE LLGAAGGQIA FNLGSAIGAW
CGGLMLTLGF AYHYVALPAA LLSFSAMSSL LVYGRLKHKQ PSVTPVAG