Gene SeSA_A0436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0436 
Symbol 
ID6518734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp448444 
End bp449655 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content52% 
IMG OID642745587 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002113411 
Protein GI194736766 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.263395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.769414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCCT GGAAAGTTAA TCTAATTTCC GTTTGGTTTG GATGTTTTTT TACCGGGCTG 
GCAATCAGCC AAATCCTGCC ATTTTTACCC CTTTATATTT CCCAGCTTGG CGTCTCTTCC 
CATGAAGCGT TATCAATGTG GTCCGGGTTA ACGTTTAGCA TCACGTTTCT TATTTCCGCC 
ATTGTGTCGC CGATGTGGGG CAGTCTCGCC GATCGTAAAG GGCGTAAACT GATGCTATTG 
CGCGCGTCGC TCGGGATGGC GATAGCTATT CTACTGCAGG CATTCGCGAC CCATGTCTGG 
CAACTTTTCC TGCTGCGCGG AATCATGGGG TTAACGTCAG GCTATATCCC CAATGCCATG 
GCGCTGGTAG CCTCTCAGGT ACCGCGCGAA CGTAGCGGCT GGGCGCTCAG TACGCTTTCT 
ACCGCGCAAA TCAGCGGCGT TATCGGCGGG CCGTTAATGG GCGGCTTTGT CGCGGATCAT 
ATCGGGCTGC GGGCGGTATT TCTGATTACC GCCATGCTGT TGGTGGTGAG CTTTCTGGTC 
ACGCTATTTT TAATTAAAGA AGGCGTACGT CCGGTCATCA GGAAAAGCGA ACGCCTGAGC 
GGTAAAGCCG TTTTTGCGTC GTTACCTTAT CCTGCGCTGG TGATCAGTTT GTTTTTTACC 
ACGATGGTCA TTCAACTCTG TAATGGTTCC ATCAGTCCAA TCCTGGCGCT GTTTATCAAA 
TCAATGATGC CGGACAGTAA TAACATCGCC TTTCTTAGCG GGTTAATTGC CTCGGTGCCC 
GGTATCTCCG CGCTTATCTC CGCGCCTCGC CTGGGAAAAC TTGGCGACAG AATCGGCACG 
GAAAGAATTC TGATGGCCAC GCTTATCTGC GCAGTGCTGC TTTTCTTCGC GATGTCCTGG 
GTCACCACGC CGTTCCAGTT GGGGCTGTTG CGTTTCTTGT TAGGCTTTGC CGATGGCGCG 
ATGTTACCCG CCGTACAAAC GTTATTGGTG AAATACTCCA GCGATCAAAT TACCGGACGT 
ATTTTTGGTT ACAACCAGTC ATTTATGTAC CTGGGCAACG TGGTTGGGCC GTTGATGGGC 
GCGACGGTAT CGGCGATGGC CGGTTTCCGC TGGGTTTTTA TCGCTACGGC GGCGATCGTG 
TTGATCAATA TTGGGCAACT GACCCTGGCG TTACGTCGTC GGCGTAACGC GCAAAAAGCG 
AAAGGCCAAT AG
 
Protein sequence
MESWKVNLIS VWFGCFFTGL AISQILPFLP LYISQLGVSS HEALSMWSGL TFSITFLISA 
IVSPMWGSLA DRKGRKLMLL RASLGMAIAI LLQAFATHVW QLFLLRGIMG LTSGYIPNAM 
ALVASQVPRE RSGWALSTLS TAQISGVIGG PLMGGFVADH IGLRAVFLIT AMLLVVSFLV 
TLFLIKEGVR PVIRKSERLS GKAVFASLPY PALVISLFFT TMVIQLCNGS ISPILALFIK 
SMMPDSNNIA FLSGLIASVP GISALISAPR LGKLGDRIGT ERILMATLIC AVLLFFAMSW 
VTTPFQLGLL RFLLGFADGA MLPAVQTLLV KYSSDQITGR IFGYNQSFMY LGNVVGPLMG 
ATVSAMAGFR WVFIATAAIV LINIGQLTLA LRRRRNAQKA KGQ