Gene SeSA_A0435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0435 
Symbol 
ID6516428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp447592 
End bp448275 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content54% 
IMG OID642745586 
Productextensin family protein 
Protein accessionYP_002113410 
Protein GI194737281 
COG category[S] Function unknown 
COG ID[COG3921] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.250587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.722758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAGGTA AGGGTTTTCT GATTATTGTG CTGTTGGGCG GCATTGGCGG ACTGGGATAT 
CGTTATCTTC CCTCTTATTA TAATCCTTTT GCTCCGCTAC AACTTGCCGA TCCGCCAGGC 
TGGATCACTA CCTTCAAACT ACAGCGCCTG ACGCCGTCGC AGTGCCGGGA GCTTTTGACG 
GCGGCCAATC AACAGGGATT AATTTCATCA CAACCTGTTG CGGATAGCAC TGGTGAATGT 
CCCTTGTCCC ATGTTGTGCG CGTCAGAGAT TTTGGCCAGG TCAAACTGAG CAGCAGTTTT 
TTAGCCTCCT GCCCGTTGGC GCTGCGCTCC GCGCTGTTTG TCGAACAGCA GGCAAAACCT 
TTAACAGAAA CGTGGATGAA GCGCCGCCTG ACCCGCATCG AACATCTGGG CAGCTATGCC 
TGCCGTAATA TTTATCACCG CCCGGATGCG CGTCGCAGTG AACATGCCAG CGCAGAAGCG 
CTGGATGTCA GCGGGTTTCA GCTATCGGAT GGCCGAAAAA TCACTGTTCT GCGCGGCTGG 
GGGCGTGAGG AGACGGGGCC CTGGTTACGC GCTATGTTAA ACGCCAGTTG CCATTATTAT 
GGCAATGGAC TCGGGCCTGA CTATAACGCT GCTCATGCTA ACCATTTTCA TCTTGGAATG 
CGGGGCTACG GCGTGTGTCG TTAA
 
Protein sequence
MRGKGFLIIV LLGGIGGLGY RYLPSYYNPF APLQLADPPG WITTFKLQRL TPSQCRELLT 
AANQQGLISS QPVADSTGEC PLSHVVRVRD FGQVKLSSSF LASCPLALRS ALFVEQQAKP 
LTETWMKRRL TRIEHLGSYA CRNIYHRPDA RRSEHASAEA LDVSGFQLSD GRKITVLRGW 
GREETGPWLR AMLNASCHYY GNGLGPDYNA AHANHFHLGM RGYGVCR