| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0427 |
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| Symbol | |
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| ID | 6515308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 437937 |
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| End bp | 440948 |
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| Gene Length | 3012 bp |
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| Protein Length | 1003 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642745579 |
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| Product | putative autotransporter/pertactin |
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| Protein accession | YP_002113403 |
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| Protein GI | 194735140 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR03304] outer membrane insertion C-terminal signal |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.326572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.353879 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTCCT GGAAAAAGAA ACTTGTAGTC TCACAATTAG CATTGGCTTG CACTCTGGCA
ATCACTTCTC AGGCGAATGC TACTACTAAT GATATTTCTG GTACCACTTA CAATACGTTT
CATCACTACA ACGATGCGAC CTACGCTGAT GGCGTTTATT ATGATGGCTA TGTAGGTTGG
AACAACTACG CAACTGATAG TTACTATAAC GGTGACATTT ATCCTGTAAT CAATAACGCG
CGAGTTAATG GCGTTATTTC TACCTACTAT CTGGATGATG GCGTTACTAC CAATACTAAT
GCGAATAGCC TGACAATTAA AAACAGTACT ATTCATGGTA TGATTACCTC CGAGTGTATG
ACTACCGATT GCGTAAATCG TGACACCGGG TATGTATATG ATCGCCTGGC GCTGACCGTT
GATAACTCTA CCATTGATGA CAACTACGAG CATTATACCT ATAACGGTAC CTATACCGAT
GGTACTGCGG ATACGCATGT TGTTGATGTT TATGACATGG GTACCGCGAT TACACTGGAT
CAGGAAGTTG ATCTGTCTAT TGTAAATAAT TCTCATGTTG CTGGTATTAC CCTGACTCAG
GGCTACGAAT GGGAAGATAT CGACGATAAC ACCGTTAGCA CTGGCGTAAA CAGCGGTGAA
GTATTTAATA ACACAATCAA TGTTGCTGAT TCTACCGTAA CCTCTGGCTC ATGGTCTGAT
GAAGGTACTT CCGGCTGGTT TGGTAATACT AATAACGCTA GCGATTACAG CGGTTCTTAT
ACTGCTGATG ACATTGCGAT TGCGGCAATT GCAAACCCAT ACGCTGATAA TGCAATGCAG
ACGACGGTCA ACCTCAGCAA CTCCACGCTG ATGGGCGATG TTGTATTCTC CAGCAATTTC
GATGAGAACT TCTTCCCGAA TGGAGCGGAT AGCTATCGTG ATACTGATGC TGACCGCGAC
ACGAACGGTT GGGATGGCAC TGACCGTATG GATGTTACCC TGAATAATGG TAGCAAATGG
GTTGGTGCAG CAATGTCTGT ACATATGACA GACACTGGTA CTGATGCCGA TGGAGACGGT
GTTTTTGAAT ATACTGTAGA TACTGACGGC GACGGTATTC TTGATGCCAC ATCTCCGGAT
GGAGTTTACG ATTCTTATGC TGTAGGTACC GAGGCAACTG CAAATCTGAT CGATATCGCA
GCTAATAGTC TGTGGCCATT ATCAACTGTA GGTGTTGATA ACATTTATAC TGACTACAGT
GAGTATAACC ATATCGTTGG TAACGAAGTT TATCAGAGCG GCCTGTTTAA CGTGACCCTG
AATACCGGAT CACAGTGGGA CACTACTAAA ACTTCTCTGA TTGATACGCT GAGTATCAAT
AGTGGTTCTG TTGTCAATGT TGCTGATTCT ACTCTGGTTT CTGACACTAT CGGCCTGACT
GGTGGTTCTG CTCTGAACAT CAATGAAGAT GGTCATGTTG CAACTGATAC CCTGTCTATC
GATAACAGTA CCGTTACGAT TGCTGATGAT GTTTCTGCTG GCTGGAGCGT AAATGATGCT
GCCCTGTACG CAAACACTAT CAACGTAACC AATAATGGTG TACTGGATGT TGGTAATAGC
GCTTCTAATG CGCTGCAGGT TGATACTCTG AACCTGACCA GCTACACCGA TGCTAACGGT
TATGTGAACG CAGGTGTTTT CAACATCGAA AGTAACCGTT TCGTACTGGA TGCTGACCTG
ACTAACGATC GTACTAACGA CACGACTAAG TCTAATTACG GTTATGGCGT GATTGCGATG
AACTCTGATG GTCATTTGAC CATTAACGGT AACGGCGATA CTTACGATAC CGACCAGACG
GAAGCAGGTC AGGATGAAGT TGATAACGTT GGTGACAATG TTGCAGCTGC AACCGGTAAC
TATAAAGTAC GTATCGACAA TGCTACAGGC ACGGGTTCTG TTGCGGATTA TAAAGGTAAT
GAGCTGATCT ATGTTAACGA TAAGAACAGC ACCGCTACCT TCTCTGCTGC AAACAAAGCT
GACCTGGGTG CTTACACCTA TCAGGCTAAG CAGGAAGGCA ACACTGTCGT GCTGGAACAG
ATGGAACTGA CCGACTACGC TAACATGGCG CTGAGCATTC CTTCTGCGAA CACCAATATC
TGGAACCTGG AACAAGACAC CGTTGGTACT CGTCTGACCA ACGCTCGTCA TGGCCTGGCG
GATAACGGCG GCGCATGGGT AAGCTACTTC GGCGGTAACT TCAACGGCGA CAACGGCACC
ATTAACTACG ATCAGGATGT TAATGGCATC ATGGTCGGTG TTGATACCAA AGTTGATGGT
AACAACGCTA AGTGGATCGT TGGTGCGGCA GCAGGCTTCG CGAAAGGCGA TCTGAGCGAT
CGTACCGGTC AGGTGGATCA GGACAGCCAG TCTGCCTACA TCTACTCTTC CGCTCGTTTC
GCAAACAACA TCTTTGTTGA TGGTAACTTG AGCTACTCTC ACTTCAACAA CGATTTGTCT
GCTAACATGA GCGACGGTAC TTACGTTGAC GGCAACACCT CTTCTGACGC CTGGGGCTTT
GGCTTGAAAC TGGGTTATGA TCTGAAGCTG GGTGATGCAG GCTACGTAAC GCCTTACGGC
AGCGTATCCG GTCTGTTCCA GTCTGGCGAC GACTACCAGC TGAGCAACGA CATGAAAGTT
GACGGTCAGT CCTACGACAG CATGCGTTAT GAAATCGGTG TAGATGCAGG TTATACCTTC
ACTTACAGCG AAGATCAGGC GCTGACGCCG TACTTCAAAC TGGCTTACGT TTACGACGAC
TCCAACAACG ATGCTGACGT AAACGGCGAC TCTATCGACA ACGGCGTAGA AGGTTCTGCG
GTACGTGTTG GTCTGGGTAC TCAGTTCAGC TTCACGAAGA ACTTCAGCGC CTACACCGAT
GCTAACTACC TCGGCGGCGG TGATGTTGAT CAAGACTGGT CTGCAAACGT TGGTGTTAAA
TATACCTGGT AA
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| Protein sequence | MHSWKKKLVV SQLALACTLA ITSQANATTN DISGTTYNTF HHYNDATYAD GVYYDGYVGW
NNYATDSYYN GDIYPVINNA RVNGVISTYY LDDGVTTNTN ANSLTIKNST IHGMITSECM
TTDCVNRDTG YVYDRLALTV DNSTIDDNYE HYTYNGTYTD GTADTHVVDV YDMGTAITLD
QEVDLSIVNN SHVAGITLTQ GYEWEDIDDN TVSTGVNSGE VFNNTINVAD STVTSGSWSD
EGTSGWFGNT NNASDYSGSY TADDIAIAAI ANPYADNAMQ TTVNLSNSTL MGDVVFSSNF
DENFFPNGAD SYRDTDADRD TNGWDGTDRM DVTLNNGSKW VGAAMSVHMT DTGTDADGDG
VFEYTVDTDG DGILDATSPD GVYDSYAVGT EATANLIDIA ANSLWPLSTV GVDNIYTDYS
EYNHIVGNEV YQSGLFNVTL NTGSQWDTTK TSLIDTLSIN SGSVVNVADS TLVSDTIGLT
GGSALNINED GHVATDTLSI DNSTVTIADD VSAGWSVNDA ALYANTINVT NNGVLDVGNS
ASNALQVDTL NLTSYTDANG YVNAGVFNIE SNRFVLDADL TNDRTNDTTK SNYGYGVIAM
NSDGHLTING NGDTYDTDQT EAGQDEVDNV GDNVAAATGN YKVRIDNATG TGSVADYKGN
ELIYVNDKNS TATFSAANKA DLGAYTYQAK QEGNTVVLEQ MELTDYANMA LSIPSANTNI
WNLEQDTVGT RLTNARHGLA DNGGAWVSYF GGNFNGDNGT INYDQDVNGI MVGVDTKVDG
NNAKWIVGAA AGFAKGDLSD RTGQVDQDSQ SAYIYSSARF ANNIFVDGNL SYSHFNNDLS
ANMSDGTYVD GNTSSDAWGF GLKLGYDLKL GDAGYVTPYG SVSGLFQSGD DYQLSNDMKV
DGQSYDSMRY EIGVDAGYTF TYSEDQALTP YFKLAYVYDD SNNDADVNGD SIDNGVEGSA
VRVGLGTQFS FTKNFSAYTD ANYLGGGDVD QDWSANVGVK YTW
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