Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0423 |
Symbol | prpE |
ID | 6518295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 434460 |
End bp | 436346 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642745575 |
Product | propionyl-CoA synthetase |
Protein accession | YP_002113399 |
Protein GI | 194736206 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | [TIGR02316] propionate--CoA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.572013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0604407 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTTA GCGAATTTTA TCAGCGTTCC ATTAACGAAC CGGAGGCGTT CTGGGCCGAG CAGGCCCGGC GTATCGACTG GCGACAGCCG TTTACGCAGA CGCTGGATCA TAGCCGTCCA CCTTTTGCCC GCTGGTTTTG CGGCGGCACC ACTAACTTAT GTCATAACGC CGTCGACCGC TGGCGGGATA AGCAGCCGGA GGCGCTGGCG CTGATTGCCG TCTCATCAGA GACCGATGAA GAGCGCACAT TTACCTTCAG CCAGTTGCAT GATGAAGTCA ACGCTGTGGC CGCTATGCTG CTGTCGCTGG GCGTGCAGCG TGGCGATCGC GTATTGGTCT ATATGCCGAT GATTGCCGAA GCGCAGATAA CCCTGCTGGC CTGCGCGCGC ATTGGCGCGA TCCATTCGGT GGTCTTTGGC GGTTTTGCCT CGCACAGCGT GGCGGCGCGC ATTGACGATG CCAGACCGGC GCTGATTGTG TCGGCGGATG CCGGAGCGCG GGGCGGTAAA ATCCTGCCGT ATAAAAAGCT GCTTGATGAC GCTATTGCGC AGGCGCAGCA TCAGCCGAAA CATGTTCTGC TGGTGGACAG AGGGCTGGCG AAAATGGCGT GGGTGGATGG GCGCGATCTG GATTTTGCCA CGTTGCGCCA GCAGCATCTC GGCGCGAGCG TGCCGGTGGC GTGGCTGGAA TCCAATGAAA CCTCATGCAT TCTTTACACC TCCGGCACTA CCGGCAAACC GAAAGGCGTC CAGCGCGACG TTGGCGGTTA TGCGGTGGCG CTGGCAACCT CGATGGACAC CATTTTTGGC GGCAAGGCGG GCGGCGTATT CTTTTGCGCA TCGGATATCG GCTGGGTCGT CGGCCACTCC TATATCGTTT ACGCGCCGCT GCTCGCAGGC ATGGCGACTA TTGTTTACGA AGGACTGCCG ACGTACCCGG ACTGCGGGGT CTGGTGGAAA ATTGTCGAGA AATACCAGGT TAACCGGATG TTTTCCGCCC CGACCGCGAT TCGCGTGCTG AAAAAATTCC CGACGGCGCA AATCCGCAAT CACGATCTCT CCTCGCTGGA GGCGCTTTAT CTGGCCGGTG AGCCGCTGGA CGAGCCGACG GCCAGTTGGG TAACGGAGAC GCTGGGTGTG CCGGTTATCG ACAATTATTG GCAGACGGAG TCCGGCTGGC CGATCATGGC GCTGGCCCGC GCGCTGGACG ACAGGCCGTC GCGTCTGGGA AGTCCCGGCG TGCCGATGTA CGGTTATAAC GTCCAGCTAC TCAATGAAGT CACCGGCGAC CCCTGCGGCA TAAATGAAAA AGGCATGCTG GTGATTGAGG GGCCGCTGCC GCCGGGCTGT ATTCAGACTA TTTGGGGCGA CGATGCGCGT TTTGTGAAGA CTTACTGGTC GCTGTTTAAC CGTCAGGTTT ATGCCACCTT CGACTGGGGA ATCCGCGATG CCGAGGGGTA TTACTTTATT CTGGGCCGTA CCGATGATGT GATTAATATT GCGGGCCATC GGCTGGGGAC GCGAGAAATA GAAGAAAGTA TCTCCGGTTA CCCGAACGTA GCGGAAGTGG CGGTGGTGGG GATAAAGGAC GCTCTGAAAG GGCAGGTAGC GGTGGCGTTT GTCATTCCGA AGCAGAGCGA TACGCTGGCG GATCGCGAGG CGGCGCGCGA CGAGGAAAAA GCGATTATGG CGCTGGTGGA CAACCAGATC GGTCACTTTG GTCGTCCGGC GCATGTCTGG TTTGTTTCGC AGCTCCCCAA AACGCGTTCC GGAAAGATGC TTCGCCGCAC GATCCAGGCG ATCTGTGAAG GCCGAGATCC GGGCGATCTG ACAACTATTG ACGATCCCGC GTCGTTGCAG CAAATTCGCC AGGCGATCGA GGAATAG
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Protein sequence | MSFSEFYQRS INEPEAFWAE QARRIDWRQP FTQTLDHSRP PFARWFCGGT TNLCHNAVDR WRDKQPEALA LIAVSSETDE ERTFTFSQLH DEVNAVAAML LSLGVQRGDR VLVYMPMIAE AQITLLACAR IGAIHSVVFG GFASHSVAAR IDDARPALIV SADAGARGGK ILPYKKLLDD AIAQAQHQPK HVLLVDRGLA KMAWVDGRDL DFATLRQQHL GASVPVAWLE SNETSCILYT SGTTGKPKGV QRDVGGYAVA LATSMDTIFG GKAGGVFFCA SDIGWVVGHS YIVYAPLLAG MATIVYEGLP TYPDCGVWWK IVEKYQVNRM FSAPTAIRVL KKFPTAQIRN HDLSSLEALY LAGEPLDEPT ASWVTETLGV PVIDNYWQTE SGWPIMALAR ALDDRPSRLG SPGVPMYGYN VQLLNEVTGD PCGINEKGML VIEGPLPPGC IQTIWGDDAR FVKTYWSLFN RQVYATFDWG IRDAEGYYFI LGRTDDVINI AGHRLGTREI EESISGYPNV AEVAVVGIKD ALKGQVAVAF VIPKQSDTLA DREAARDEEK AIMALVDNQI GHFGRPAHVW FVSQLPKTRS GKMLRRTIQA ICEGRDPGDL TTIDDPASLQ QIRQAIEE
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