Gene SeSA_A0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0415 
Symbol 
ID6516469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp424296 
End bp425300 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content58% 
IMG OID642745567 
ProductAraC-family transcriptional regulator 
Protein accessionYP_002113391 
Protein GI194735807 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.0023741 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTCCGA TCTCCTGTCA CTCTTCCGTC GCCCCGGCGA TGAAAAAGAT CTTTTCCGTC 
AGCGACTTCA TCGCGTTTGG CGAGCGTTAT GGCATTGATT ACCGCTTCCC TGCGTTACCG 
CAGTATACGC AGAGTAGTCC CGTACTTCAT GGCGATATCG AAGAGATAGC GCTTCCCGGC 
GGGATTTGCA TTACACGCTC GGATGTTCAC GTGTTACAAC CTTATGAAAC CACCTCTCGC 
CATAGCAGTC CGCTGTATAT GCTGGTGGTG CTGGAAGGTA ACGTCGCGCT GGCTGTCAAT 
GAGCAGACCT TTTTGTTGAG CGCGGGGATG GCGTTTTGCT CGCAACTGAG TGAGCAGCAG 
ACGATACGCG CCCATCACGG CGCAGACAGT AAATTGCGCA CCTTATCGCT GGGAATGTAC 
CCGGACGGCG GATGGCGGGA GCGTTTGCCT GTCTCGCTGG CAGACGAGTG GGAACGTAGC 
GCGGCCTCGG CGAGGGTCTG GCAGGTGCCG GAGTTTCTGC TTTCAGGGCT ACGTTATGCG 
CAGCAGCCCG GACCTCATGC GGCGTCACGC CAGTTAATGC TGGAAGGCAT CATGCTGCAA 
TTGCTGGGCT ATGCGCTAAA TCTATGTCAG CCCGCAACGC AAAAACGCGG GCTTCCCGTC 
ACCGGTGAAT ACCAGCGGCT GGAGCTCATT CGGCGTTTAC TGGAGCAGAC GCCGGAAAAA 
GCCTACACGC TGAACGAACT GGCGCATCGG GCGGCAATGA GTCCAAGTAG CCTGCGGTGC 
AAGTTTCGCC ATGCCTATGG GTGTACCGTG TTTGATTATC TGCGCGATTG CCGCCTGGCG 
CGCGCGCGTC GTTATCTGAT GGAGGGATAC AGCGTGCAGC AGGCCGCCTG GATGTCAGGC 
TATCAACATG CCACAAACTT TGCGACGGCA TTTCGTCGGC GTTATGGCTG CTCGCCCGGC 
GAGCTGCGTG ACGCGTCTCT GACGGCGTCC CGACACTGTG CGTAA
 
Protein sequence
MSPISCHSSV APAMKKIFSV SDFIAFGERY GIDYRFPALP QYTQSSPVLH GDIEEIALPG 
GICITRSDVH VLQPYETTSR HSSPLYMLVV LEGNVALAVN EQTFLLSAGM AFCSQLSEQQ 
TIRAHHGADS KLRTLSLGMY PDGGWRERLP VSLADEWERS AASARVWQVP EFLLSGLRYA 
QQPGPHAASR QLMLEGIMLQ LLGYALNLCQ PATQKRGLPV TGEYQRLELI RRLLEQTPEK 
AYTLNELAHR AAMSPSSLRC KFRHAYGCTV FDYLRDCRLA RARRYLMEGY SVQQAAWMSG 
YQHATNFATA FRRRYGCSPG ELRDASLTAS RHCA