Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0405 |
Symbol | |
ID | 6519145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 409840 |
End bp | 411066 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642745557 |
Product | putative auxiliary transport protein, membrane fusion protein (MFP) family |
Protein accession | YP_002113381 |
Protein GI | 194736646 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.738714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000278759 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTAGAA CATTCAAAAT TATGTTGATA GCCGGCGTCA TCGCCGCCAT CGGGGGCGTG ATTTACATTG CCGGCGAAGC ACTATGGGAT AAAGACAACG CCGTCGGACC ACCGGCCAGC GCGCCGCCTC CACCGTCGGT ACCGGTTGCT AAAGCCCTTA GCCGCACACT CGCGCCTACG GCGGAATTCA CCGGTTTTCT GGCCGCGCCG GAGACCGTAG AGCTGCGTTC GCGCGTGGGA GGAACCCTTG ACGCCGTCAG CGTTCCGGAA GGACGTCTGG TAAGCCGCGG ACAACTGCTG TTCCAGATCG ATCCGCGCCC GTTCGAGGTC GCCCTCGACA CCGCCGTCGC GCAATTACGT CAGGCTGAAG TACTGGCCCG CCAGGCGCAG GCGGATTTCG ATCGCATTCA ACGACTGGTC GCCAGCGGCG CCGTATCACG TAAAAACGCT GACGATGTCA CCGCCACGCG TAATGCGCGA CAGGCGCAGA TGCAATCGGC CAAAGCCGCC GTCGCCGCAG CGCGCCTTGA ACTCTCCTGG ACCCGTATTA CCGCGCCCAT TGCCGGACGC GTTGACCGCA TACTGGTGAC CCGGGGCAAT CTGGTCAGCG GCGGCGTAGC GGGTAACGCC ACGCTTCTGA CGACTATCGT GTCTCACAAT CCCATGTATG TGTATTTCGA TATTGACGAA GCCACCTGGC TGAAGGCGTT ACGGCATAAC CGCTCCGACA AAAATCCACC GGTAGTCAAC ATGGGGTTAA CCACCGATAA CGGGCTGCCT TATCAGGGCG TACTCGACTT TATGGGCAAT CAGATGAACC GCAGCACCGG CACTATCCGG GCGCGCGCCG TGATTCCTGA CCCCGACGGA ATGCTTTCTC CCGGCCTGTT TGCCCGAATC AGTTTGCCCA TCGGCGAGCC GCGGGAAACC GTGCTGATTG ACGATCTGGC GGTGAGCGCC GATCAGGGCA AAAACTATGT GCTGATCGTC GGCAAGGAGA ATCAGGTGGA GTATCGTCCG GTTGAGCTGG GACAAATGGT CGATGGACTC CGCGTCGTTA CACAGGGAGT ACAGCCGGGA GAAAAAATCA TCCTCAAGGG GCTGGTGCGT CCTGGCATGA CCGTTGCGCC GCGTCTGGTG CCGATGCGGC AGAATGTGGC CGACAAACAG ACCGCGACAT TGACTAAAGC GGACGGCGAC AGTGCGTCGA AGGCGGTGCG CCAATGA
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Protein sequence | MRRTFKIMLI AGVIAAIGGV IYIAGEALWD KDNAVGPPAS APPPPSVPVA KALSRTLAPT AEFTGFLAAP ETVELRSRVG GTLDAVSVPE GRLVSRGQLL FQIDPRPFEV ALDTAVAQLR QAEVLARQAQ ADFDRIQRLV ASGAVSRKNA DDVTATRNAR QAQMQSAKAA VAAARLELSW TRITAPIAGR VDRILVTRGN LVSGGVAGNA TLLTTIVSHN PMYVYFDIDE ATWLKALRHN RSDKNPPVVN MGLTTDNGLP YQGVLDFMGN QMNRSTGTIR ARAVIPDPDG MLSPGLFARI SLPIGEPRET VLIDDLAVSA DQGKNYVLIV GKENQVEYRP VELGQMVDGL RVVTQGVQPG EKIILKGLVR PGMTVAPRLV PMRQNVADKQ TATLTKADGD SASKAVRQ
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