Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0396 |
Symbol | |
ID | 6519375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 399917 |
End bp | 401467 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642745548 |
Product | cyclic diguanylate phosphodiesterase (EAL) domain protein |
Protein accession | YP_002113372 |
Protein GI | 194736853 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0476649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000376911 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTTGTTTA TTGCCGTTCC ACTGATCGTC ATGATATTGG TGGGGTTACT CGCGGGTATC TTCCAGCTAA AACGAGATAT CGCCGTCAGC GCCAATACGC TGCTGCGGTT TAGCGCGGAT ATATCTGCCG CCTCCTGGCA AGTCGCCGGA AAAGCCACCA GACTGGCTGA GAGTTCCTGT ACTGACACGC TGAAAGAACT GTCCAGAACG CGGGCCTTCA CTCCTTATGT CCGTGACATT GGGTTTCTGG AAAATGGTGA TATCACTTGC TCCTTTGTCA CAGGAACCGA ACGCTATCAT TTTTCCCGGC TGGCAGGGCT TTCTTTACCT GCTTCTTATC CGAAACGGTG GTTGCGATCT ATCGGTAGTA TGGCCGAAGG ACCCAATCGC CTTGTTGTGG TTTATGTGAA AAAAGTAGCA GCGAATAAAG CGGCCTTCGT CATTGTGGAC TCGCAGTATG TCCAGGAGCT CATGGAGATA TTGGCTGCAG AGAGAGCATC AGCCTTTAGC CTGACATTCG GCGCAGGGGA GGCGATTACC AGCGCTGCGA CGTTGCGCGG TAAGGCGTTT TTAACGCAGC GGTTCACCTC AACCGATCAC ACTATCCAGC TGATGGTGCG AACCCCTTTC TCAACGTTAT CGGCATACTG GTTACAAAAC CTTTTTATTT TTGTTCCGCT GTCATTGTGT CTTTCTGTAG GGATGATGTT GTTCTACAGG CGCTGGTATT TAAAACGTTT ATCTCTGGCC CGGGAGATTG CCAGGGGAAT AACGCACAAT GAGTTTACGG TACATTATCA GCCTGTTTTT AATGTTAAAC ACGGTAGTTG CGGCGGCGTG GAGGCGCTAA TGCGCTGGCC GCAACCGGAT GGCCGTTTTA TAACCCCGGA TATTTTTATT ACCGCCGCAG AAAATGAAGG CATGATTATT CCACTCTCTC GTCATCTGTT CGAACTGATT GCTCATGACG TAATAAACTG GACTGTACCG GATGATTTCT ATATCAGCGT AAATATATCG CCTGCGCATC TTATGGATGA CGGTTTTATA CAAGATATAG AGGCGCTCAG GACTCGTTTG GGAACGATAA CGCTTATGTT GGAGCTCACC GAGCGTAGCC TGATTGTAGA ACCTTCACAG GTCGCAGAAA AACTTTCAAC GCTCCGTGAA AAAGGCGTGT TAATAGCGAT TGATGATTTT GGGACCGGCT ATTGCTCACT CTCCTATCTC CAGCAATTAC CTGTAGACTC TCTTAAAATA GACAGAACGT TTATCGATAC CATTGATACC AGCAGCGATG ATGTTCCTGT CCTGGATACT ATCATTACGC TGAGTCAGCG ACTGGGGCTT AATGTGGTTG CCGAAGGGGT CAGTACCCAG CACCAATTGC GTTACATCTT AAGCCACGGG GTAGGATTCG TTCAGGGATT TCTTTATGCC AGGCCGATGG GGGCTAATGA CTTTATGAGC TGGCTTGGCA AGTCGGCCCA GAGGCAAAAT GGTTTACTCA AGGGGGAAAA CGGATCCGCG AGCGGCCTGG TGGCTGAATA A
|
Protein sequence | MLFIAVPLIV MILVGLLAGI FQLKRDIAVS ANTLLRFSAD ISAASWQVAG KATRLAESSC TDTLKELSRT RAFTPYVRDI GFLENGDITC SFVTGTERYH FSRLAGLSLP ASYPKRWLRS IGSMAEGPNR LVVVYVKKVA ANKAAFVIVD SQYVQELMEI LAAERASAFS LTFGAGEAIT SAATLRGKAF LTQRFTSTDH TIQLMVRTPF STLSAYWLQN LFIFVPLSLC LSVGMMLFYR RWYLKRLSLA REIARGITHN EFTVHYQPVF NVKHGSCGGV EALMRWPQPD GRFITPDIFI TAAENEGMII PLSRHLFELI AHDVINWTVP DDFYISVNIS PAHLMDDGFI QDIEALRTRL GTITLMLELT ERSLIVEPSQ VAEKLSTLRE KGVLIAIDDF GTGYCSLSYL QQLPVDSLKI DRTFIDTIDT SSDDVPVLDT IITLSQRLGL NVVAEGVSTQ HQLRYILSHG VGFVQGFLYA RPMGANDFMS WLGKSAQRQN GLLKGENGSA SGLVAE
|
| |