| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0389 |
|---|
| Symbol | |
|---|
| ID | 6518502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 391751 |
|---|
| End bp | 392509 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642745541 |
|---|
| Product | fimbrial chaperone protein |
|---|
| Protein accession | YP_002113365 |
|---|
| Protein GI | 194736580 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0895943 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAATT ACAGGCAGTG GTTAGTTTTC AGTAAAGTCA TATTAACGCT ACTTGGGTTG
ACGGGATTGT ATGGCCCGGC ACAAGCCGCC GTTAATATTG ACAGAACCCG AATTATTTTT
GCTTCAGATG ATATCGCTCA ATCGTTGACA TTATCCAACG ATAATACAAC GCCGATGCTG
TTACAGGTAT GGACCGACGC CGGAAACATT GACGCCTCTC CGGATAATAG CAAAACGCCG
CTGGTGGCGC TGCCGCCGGT ATTTAAAATG CAGCCAGGGG AACTGAGAAC GCTTCGCCTG
CTCCTGAGTT CCCGCCAGCA GCTTGCAACG GACCGGGAGA GTCTCTTCTG GCTAAACATT
TATCAGATAC CGCCACTCCC CCATGACATT AAAAACAACC CGCGAAAACT GGTATTACCG
CTTCGTTTGC GGCTAAAAAT TTTAATTCGC CCGACCGGGC TAAAAGCGCC AACGGAAGCG
GAGGAGAAAA AATTACGTTT TATTGCTAAA GAGAATACTA TACGGATAGT TAACCCCACC
TCGTGGTATA TGAGTTTAAC GCTAACGACG GATGACAAGA AAAGTATCGG CGATATCATG
GTTGCGCCGA AAACAGCACT TGATGTGCCG CTAACACGCT CGCCAACGCC GGGAGCATCG
ATAAATTATG CAGTAATCAA TGACTCCGGG AACTGGCGAC AATATACCGC CATACTGGAA
AAATATATTA GTAAGAGTGA TTTTATTCCT GAGTTTTGA
|
|---|
| Protein sequence | MRNYRQWLVF SKVILTLLGL TGLYGPAQAA VNIDRTRIIF ASDDIAQSLT LSNDNTTPML
LQVWTDAGNI DASPDNSKTP LVALPPVFKM QPGELRTLRL LLSSRQQLAT DRESLFWLNI
YQIPPLPHDI KNNPRKLVLP LRLRLKILIR PTGLKAPTEA EEKKLRFIAK ENTIRIVNPT
SWYMSLTLTT DDKKSIGDIM VAPKTALDVP LTRSPTPGAS INYAVINDSG NWRQYTAILE
KYISKSDFIP EF
|
|---|
| |