Gene SeSA_A0374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0374 
Symbol 
ID6519986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp379241 
End bp380431 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content47% 
IMG OID642745526 
Productsite-specific recombinase, phage integrase family 
Protein accessionYP_002113350 
Protein GI194737537 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.324346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.794104 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTGA ATGCCCGTAA GGTTGAAGCC GCCAAAGGAA AAGAGAAGAG CTATAAGCTC 
GCTGATGGCG GCGGCCTGTA TCTTCAGGTA GAACCCAATG GTTCACGATA TTGGCGAATG 
AAGTATCGCT TCGCGGGTAA AGAAAAACGC CTATCTTTTG GCGTCTATCC AGCTGTCAGC 
CTTGCTGATG CTAGGCAAAA GCGCGAAGAC GCAAAGAAAT TACTCGCAGC AGGTAACGAT 
CCTGGCGAAG TAAAGAAAGC GAAGAAGCTG GCTTTGACCT CTGCCACTGA GATAGTCAAC 
CCGTTCAAAG AGGTCGCGTT AGAGTGGCAC AAAATGAAGT CACCAAAATG GTCAAAGGGC 
TACGCTTCCG ACATCCTTGA GGCCTTCGAG AAGGATATCT TTCCCCATAT TGGGCAACGA 
CCTATTGCGG ATATTAAACC CCTCGAACTA CTAGAAGTGC TGAGACTGAT AGAAGCCAGA 
GGTGCGATGG AAAAAGCGAA GAAAGTCCGC CAGCGATGTG GAGAAGTTTT CCGTTATGCC 
ATCGTAACAG GGCGAGCAAT TTACAATCCT GCACCGGATC TCGCCAGCGC AATGCAGGGC 
CATGAAGCCG TCCATTATCC TTTCCTTAAA GCCACCGAAT TACCCGAGTT CTTTACCGCC 
CTGAATGCCT ATACAGGAAG CCCGATTGTT GTGCTGGGAG CACATTTACT TATCCTGACA 
GGACTGAGAA CGGGTGAGCT ACGCGCCGCT GAATGGTGTG AAATTGATTT TGATAACGCT 
CTTTGGGAAA TACCAAAAGA ACGCATGAAA ATGCGTCGTG CGCATCTTGT GCCGCTTTCA 
AATCAAGCAT TAGCCCTTCT TGAAACCTTA AAAGAACTGA CTGGAAACTA TCCTTTGATG 
TTTCCTGGGC GTAACGATCC TAGCAAATCT ATGAGTGAAG CAAGCATTAA TCAGGTGTTT 
AAACGTATTG GATATGCAGG GCGTGTTACG GGGCATGGTT TCAGGCATAC GATGAGTACG 
ATTCTACATG AGAAAGGATT TAACAGCGCT TGGATTGAAA CCCAGCTTGC TCATTTGGAC 
AAAAATTCTA TTCGTGGAAT TTATAACCAT GCCCAATATC TCGAAGGGCG AAGAGAAATG 
ATGCAATGGT ATGCTAATTA TTTATCTGAG CTGGTTGGTA ATCATAAATG A
 
Protein sequence
MMLNARKVEA AKGKEKSYKL ADGGGLYLQV EPNGSRYWRM KYRFAGKEKR LSFGVYPAVS 
LADARQKRED AKKLLAAGND PGEVKKAKKL ALTSATEIVN PFKEVALEWH KMKSPKWSKG 
YASDILEAFE KDIFPHIGQR PIADIKPLEL LEVLRLIEAR GAMEKAKKVR QRCGEVFRYA 
IVTGRAIYNP APDLASAMQG HEAVHYPFLK ATELPEFFTA LNAYTGSPIV VLGAHLLILT 
GLRTGELRAA EWCEIDFDNA LWEIPKERMK MRRAHLVPLS NQALALLETL KELTGNYPLM 
FPGRNDPSKS MSEASINQVF KRIGYAGRVT GHGFRHTMST ILHEKGFNSA WIETQLAHLD 
KNSIRGIYNH AQYLEGRREM MQWYANYLSE LVGNHK