Gene SeSA_A0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0354 
Symbol 
ID6515341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp360160 
End bp360879 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content43% 
IMG OID642745506 
Productputative outer membrane adhesin 
Protein accessionYP_002113331 
Protein GI194734644 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.408494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACT TTTTCGCAGT CTGCATCATT CCCCTTGTGG TAGCCTGGTC CGCTACTGCA 
TCAGCAAAAG AAGGGATCTA TATCACCGGG AAAGCGGGGA CATCCGTAGT CAATGTCTAT 
GGAATCAACT CAACCTTCAG CCAGGATGAG ATAGTCAATG GTCATGCAAC GTTACCTGAC 
CGTACCAAAG GCGTTTTTGG CGGCGGGGTT GCTATCGGTT ATGACTTTTA TGATCCATTC 
CAGCTTCCAG TACGTTTAGA ACTGGATACC ACTTTCAGAG GTGAGACGGA TGCTAAAGGC 
GGGCAGGATA TTATTGCATT TGGTCAGCCA GTACACATAA ATGTAAAAAA TCAGGTCCGA 
ATGACCACTT ACATGGTTAA TGGCTATTAT GATTTTCACA ATAGTACGGC ATTTACACCC 
TATATCAGCG CAGGCGTTGG CCTCGCTCAT GTGAAGCTAA GTAATAACAC CATTCCTGTT 
GGTTTTGGTA TTAATGAAAC TCTGTCTGCT TCAAAAAATA ACTTTGCCTG GGGCGCAGGT 
ATCGGTGCAA AATATGCTGT AACAGATAAT ATTATGATTG ACGCCAGTTA TAAATACATT 
AATGCAGGCA AAGTAAGCAT TTCAAAAAAT CACTATGCTG GTGATGAACA TACCGCTTAT 
GATGCAGACA CAAAGGCTGC CTCCAATGAC TTCATGCTCG GCATTACTTA CGCCTTTTAA
 
Protein sequence
MKNFFAVCII PLVVAWSATA SAKEGIYITG KAGTSVVNVY GINSTFSQDE IVNGHATLPD 
RTKGVFGGGV AIGYDFYDPF QLPVRLELDT TFRGETDAKG GQDIIAFGQP VHINVKNQVR 
MTTYMVNGYY DFHNSTAFTP YISAGVGLAH VKLSNNTIPV GFGINETLSA SKNNFAWGAG 
IGAKYAVTDN IMIDASYKYI NAGKVSISKN HYAGDEHTAY DADTKAASND FMLGITYAF