| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0347 |
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| Symbol | |
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| ID | 6517666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 354093 |
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| End bp | 356780 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642745499 |
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| Product | TcfC protein |
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| Protein accession | YP_002113324 |
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| Protein GI | 194738117 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0932799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCGTT ATTTCTGGAT GTATTATTTA CTGGGATTGT GCAGTTTTAC CAGCCAGGCA
ACTCTTATTC CCCCTCCTGG ATTTGAATCT CTGCTGGAAG GACAGACTGA GCAAATTGAA
GTGTTGCTAC CAGGGCATTC ACTGGGATTA TTTCCGGTGG TGGTTAAACC GGACACCGTG
CAGTTTATGT CCCCATTGAT GGTACTTGAA AGCAGTGGGC TTGCCGCGTT GCCGGCCGCA
GAACGGCAAA AAGCGCTGGC TGCACTCAGC CGTCCGTTGC TACGTAACAG CAATCTGGTC
TGTGGTGTCT CAGAAGCAAA AGACAGCAGC GAGTGTGGTT ACGTGGCAAC AGATAAAGAG
GATGTTGCGG TTATTTTTGA TGAGAACAAC GGTCAGTTAT CTTTGTTTCT TAACCGGGAC
TGGTTGCCGG ATGAAGAACG ACGTGATAAA CGCTGGCTGA CTCCGACCCC GGAGGGTGTC
AGCGCATTTA TTCACCGCCA GACGCTGTAT CTGAGTGATG ATCTCCACAG TCGTAATATG
ACACTGAATG GTAGCGGTGC CCTGGGGCTT GGTGACGGTC GTTATCTGGG AGGCAACTGG
GCAGCTATCT GGAATCAGTC AGAACATTAC AATAACAGTC AGACCTGGTT TGACAATCTG
TTTGTCCGTC AGGATCTCGG CAATCAGTAT TATCTCCAGG CTGGTCGGAT GGATCAGCGG
AATCTGTCCA GCGCCACGGG GGGGGATTTT GGGTTCAGTC TGCTTCCCCT GAGCCGGTTT
GATGGATTAC GAACCGGGAC CACCCAAGCT TATGTTAACC ATGAGGTGGA CCAGAATGCC
ACTCCGGTTA TGGTTCAGGT TACCCGAAAT GCCCGTATTG ATATTTATCG TGGCAGCGAG
TTGCTGGGGA GTCAGTTCCT GACCCCGGGA ATGCATACCC TGGATACTCA CTCTCTTCCA
CCGGGAAGCT ATCCTCTGGC GTTGCGGATA TATGAGGATG GAATTCTGCG ACGAACGGAG
AGCCAGCCCT TCAGTAAGGG GGGTAATAGC TTCAGTGCAC AGACCCAGTG GTTTATTCAG
GGCGGGCAGG AAGATACCGG GGATAAAGCC AGCCATTATG ACGGTGAGAC TGTCATGGCT
GCCGGATTCC GAACTGGGCT GCGGAAAAAT ATCAGTCTGA CCGAAGGTAT CTCTCTGGCA
CATGAGGCCT GGTACAGTGA AACCCGACTG AATTCACAGC ATGCAGTGCT GGATGGCACG
CTGGACCTTT CTGCCGGGAT ACTGCATGGG ACAGACAGCA CGAGCGGTAA CACTGAGCAG
GTGACATACA ACGACGGATT TTCCGCGAGT CTGTGGCGTA ACCATACGGA AAGTGATGCC
TGTAGTGGTC GTCATCCACA GTCAGTGCAT GCCAGTATGA CCTGCCAGAC TTCGATGAAC
GCCTCCCTGT CGGTTCCGGT GGGGAACTGG TATGCCCTAC TGGGATACAG TACCAGCAGG
ACAGAAGGCC GGCCGGTTTA CCGGGGATAT GATGATAACA GTGACAAAGA AAATGTGTTC
TGGCGACAGG CATACATCCC TGCCTCTCAC CGCGAATCTG CTCAGGCTAG TGCAACGTAC
AGCCTTAATA TGGCTGGCAT GAATATTAAT ACCCATGGGG GAGTATGGCG AACCCGAAAT
GACGGAGTGA ATGATGATGG CTTGTTTATG AGTGTCAGTG TGTCATATGC CTCTCAACCA
CCGACAATGA CTGGCAGTAA TGGGTATACC TCAGCCGGGA CCGATATTCA CAGTAGCCGG
AATCAAAAAA CACAGACGTC CTGGAATGTG AACCATGTGA GATCCTGGCA GCAGGATCTG
TATCGTGAAC TGTCGGTGGG TTTCTCCGGT TATAACGACG ACAGCTGGAG CGGGAGTCTC
GGCGGACGCA TGAGCGGCCG TATGGGTGAA CTGAGCGCCA CTATCAGTAA CTCCCATCAA
CGTAATGCGG GCAGCGCCAG TTCACTCACC GCTGGCTACA GCTCGTCTCT GGCGTTATCC
CGTAATGGAC TGTTCTGGGG AGGTGGTCAG GACGGTGAAC CGGCCTCTGG CATGGCGGTG
AACGTGGAGT CAGAGGGGGA CGAGGGCAGT AGCGGGAAAG TAGTCAGCGT TCGTGGCAGC
AGCCAGCCGT TCAGTCTCGG TTTTGGTCAG CAGTCGCTGT TGCTGATGGA AGGCTATAAC
GCCACGGAGG TGACCATTGA GGATGCAGGG GTTAGTTCAC AGGGTATGGC AGACGTAAAA
GCGGGAGGGG GAAGCAGGCG TTACTTCCTG ACACCCGGGC ATCTGCTGGT TCACAACATC
AGCGCCAGTA TGAGCCGACT GTACGTTGGC CGCGTACTGG ACAAGGATGG CAGACCGCTG
CTGGACGCAC AGCCACTGAA CCATCCATTT TTGTCGCTGG GACCTTCCGG GCGATTTAGC
CTGCAGAGCG AGCATAAAGA ATCCAGCCTG TGGCTGCTGT CTAAAAACAG GATCCTGCGT
TGTCCGATGT CAGTACATAA ACGTCGGGAT GTTATGCAGG TAGTGGGTGA TGTGCGGTGT
GAATTAAGTG ACGTGGATGC CCTGCCACAG GCGTTGCAAA TATCGCCGCG GGTCATCCGT
TTGCTGAACG TGGCAGGTTT GCTGCGCCAT TCCGTTCAGG AAGCCTGA
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| Protein sequence | MSRYFWMYYL LGLCSFTSQA TLIPPPGFES LLEGQTEQIE VLLPGHSLGL FPVVVKPDTV
QFMSPLMVLE SSGLAALPAA ERQKALAALS RPLLRNSNLV CGVSEAKDSS ECGYVATDKE
DVAVIFDENN GQLSLFLNRD WLPDEERRDK RWLTPTPEGV SAFIHRQTLY LSDDLHSRNM
TLNGSGALGL GDGRYLGGNW AAIWNQSEHY NNSQTWFDNL FVRQDLGNQY YLQAGRMDQR
NLSSATGGDF GFSLLPLSRF DGLRTGTTQA YVNHEVDQNA TPVMVQVTRN ARIDIYRGSE
LLGSQFLTPG MHTLDTHSLP PGSYPLALRI YEDGILRRTE SQPFSKGGNS FSAQTQWFIQ
GGQEDTGDKA SHYDGETVMA AGFRTGLRKN ISLTEGISLA HEAWYSETRL NSQHAVLDGT
LDLSAGILHG TDSTSGNTEQ VTYNDGFSAS LWRNHTESDA CSGRHPQSVH ASMTCQTSMN
ASLSVPVGNW YALLGYSTSR TEGRPVYRGY DDNSDKENVF WRQAYIPASH RESAQASATY
SLNMAGMNIN THGGVWRTRN DGVNDDGLFM SVSVSYASQP PTMTGSNGYT SAGTDIHSSR
NQKTQTSWNV NHVRSWQQDL YRELSVGFSG YNDDSWSGSL GGRMSGRMGE LSATISNSHQ
RNAGSASSLT AGYSSSLALS RNGLFWGGGQ DGEPASGMAV NVESEGDEGS SGKVVSVRGS
SQPFSLGFGQ QSLLLMEGYN ATEVTIEDAG VSSQGMADVK AGGGSRRYFL TPGHLLVHNI
SASMSRLYVG RVLDKDGRPL LDAQPLNHPF LSLGPSGRFS LQSEHKESSL WLLSKNRILR
CPMSVHKRRD VMQVVGDVRC ELSDVDALPQ ALQISPRVIR LLNVAGLLRH SVQEA
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