| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0322 |
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| Symbol | |
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| ID | 6519147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 332051 |
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| End bp | 334243 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642745481 |
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| Product | Rhs-family protein |
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| Protein accession | YP_002113306 |
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| Protein GI | 194735863 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0393811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTG TATCCACAAA TAATAAATCC GGTATGGGGG GGCTGACGAC AACCACGCCG
CCGATAACAG GTGAAAACAG TGGAACTACA GCAGGTTCGG TTGCCGGAAG CGTGGCGGGA
GCCGCAGAAG CGGCAGTGGA ACAGGCGCTG GGATCTCTGA TGGGCGACCT GCCTGAACCG
TCGGGGTTGG TGAAAGCAGC GGTGGCTGCG GCGGCACAGG CTGCGGCAGC GGCGGGCGCG
GCGCAGGATG TGATATCGGC ACTAATTTCT GGTGCAACCA GCGGGCCGGG CGCACATAAC
GTGACGGTCA GCGGCAGCGC AGTTCCACCG CAGATGCTGC TGTTTTCCAG TCTGAACGGC
TCGGAAGCTC TCGGTAGCTT GTTTACCTAC ATCGTACAGC TAAAAACGCC CGACACCCTG
AATCTGGGCT ATGTCTCCCC CGCAGCCAAC CTGCCGCTTA AAGCCATGGT GGGCAAAGAT
TTGTGCGTCA ACATCGAACT GGATGGCGGC GGCAAACGGC ATATCAGCGG GCTGGTCACG
GCGGCGCGGG TGGTGGGCCA TGAAGGGCGT TCTGTTACCT ATGAGCTGCG TATGGAGCCG
TGGGTAAAAC TGCTGACCCA CACCAGCGAC TACAAGGCAT TCCAGAATAA AACCGTGGTG
GACATTCTCG ATGAAGTGCT GGCTGAGTAT CCGTATCCGG TGGAAAAGCG ACTGGTGGAA
AGCTACCCGG TACGCACCTG GCAGGTACAG TACGGTGAAA CTGATTTTGA TTTTCTTCAG
CGACTGATGC AGGAGTGGGG CATCTACTGG TGGTTTGAGC ACAGCGAGGA CAGCCACACG
CTGGTGCTGG CGGATGCCAT CAGTACACAT CACGCCTGCC CGGATTCACC GGAGGTAGAA
TGGCATCAAA AAGGGTTAAA GCTGGATAAA GCATTTATCC ACACCATTAT AGCCAATGAA
AGTCTGCGTA CCGGGCAGTG GGTACTGGAT GATTTTGACT TTAAAAAACC GCGCTCGCGG
CTGGCGAACA CAGTGGCAAA CCCGCGTGAA ACCGGCCATG CCAGTTACGA ACACTACGAA
TGGCCGGGCG ATTATTTCGA CAAGGGCGAA GGCGAAATGC TGACGCGCAT TCGTATGGAA
GCGCAGCGCA GCCCTGGCAG CCGGGTTCAC GGTGCCGGGA ATATCCGTAC GCTGATGACT
GGCTACACCT TTGCGTTGAT GAATCACCCT ACGGCAGAAC TCAACCAGGA ATATCTGTTG
GCGCAGACTA CGCTGTTTGT GCAGGACAAC GCGCAGCACA GCGGGCAGGA CCAGCACTTT
ACCTTTTCCA CCCGTTTTGA ACTGCACCCG ACCCGTGAGG TGTTCCGCCC GCAGCGGACG
GTGAGCAAAC CCCACACCAA AGGGCCGCAG AGCGCCATCG TCACCGGCCC GGCGGGCCAG
GAAATCTGGA CGGATCAGTA CGGGCGGGTA AAGGTGCAGT TTGGCTGGGA CCGTTACGGC
AAAATGGATG AAAACAGCTC CTGCTGGATA CGCGTCAGCT ACCCATGGGC GGGCAAAGGC
TTCGGGATGA TCCAGATCCC GCGTATCGGC CAGGAAGTGC TGGTGGATTT CAAAAACGGC
GATCCGGATC TGCCGATCAT CGTGGGGCGT ACCTACAACC AGGACACCAT GCCGCCGTGG
GGACTGCCGG GAATGGCGTC GCAGAGCGGG ATCTTCAGCC ACTCGCTGTA TGGCGGGCCA
ACGAACGGCA ACATGCTGCG TTTTGACGAC AAAACCGGCG CGGAGGAAGT GAAGTTCCAC
GCGGAAAAAG ATCTCAACAC CACGGTGAAG AATAATGAAA CGCATACGGT TATGGTGGAT
CGCACTAAAA CCATTATTAA AAATGAAACC AACAGTATTG GTGAGGACAG AAACACCACG
GTAACGAAGA ATGACGGCCT TTCCGTAAAA CTGGCGCAGA CGATCAATAT CGGCACCACT
TATCGTTTAG ATGTTGGCGA TCAATTCACG CTTCGCTGCG GCAATGCGGC GCTTGTTTTA
CATAAGGACG GCTCCATTGA GTTTTGTGGC AAGCAACTGA TGTTACATAC CAGCGATGTC
ATGCAACTGA TTGGTAAAGG TATTGATATG AACCCGGATG GCGGCACAGC CGTAACCGCC
GATGATATTG CCCCCCTTCC CACCTCTGAA TGA
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| Protein sequence | MSFVSTNNKS GMGGLTTTTP PITGENSGTT AGSVAGSVAG AAEAAVEQAL GSLMGDLPEP
SGLVKAAVAA AAQAAAAAGA AQDVISALIS GATSGPGAHN VTVSGSAVPP QMLLFSSLNG
SEALGSLFTY IVQLKTPDTL NLGYVSPAAN LPLKAMVGKD LCVNIELDGG GKRHISGLVT
AARVVGHEGR SVTYELRMEP WVKLLTHTSD YKAFQNKTVV DILDEVLAEY PYPVEKRLVE
SYPVRTWQVQ YGETDFDFLQ RLMQEWGIYW WFEHSEDSHT LVLADAISTH HACPDSPEVE
WHQKGLKLDK AFIHTIIANE SLRTGQWVLD DFDFKKPRSR LANTVANPRE TGHASYEHYE
WPGDYFDKGE GEMLTRIRME AQRSPGSRVH GAGNIRTLMT GYTFALMNHP TAELNQEYLL
AQTTLFVQDN AQHSGQDQHF TFSTRFELHP TREVFRPQRT VSKPHTKGPQ SAIVTGPAGQ
EIWTDQYGRV KVQFGWDRYG KMDENSSCWI RVSYPWAGKG FGMIQIPRIG QEVLVDFKNG
DPDLPIIVGR TYNQDTMPPW GLPGMASQSG IFSHSLYGGP TNGNMLRFDD KTGAEEVKFH
AEKDLNTTVK NNETHTVMVD RTKTIIKNET NSIGEDRNTT VTKNDGLSVK LAQTINIGTT
YRLDVGDQFT LRCGNAALVL HKDGSIEFCG KQLMLHTSDV MQLIGKGIDM NPDGGTAVTA
DDIAPLPTSE
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