Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0300 |
Symbol | |
ID | 6518928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 311112 |
End bp | 311936 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642745461 |
Product | SciE protein |
Protein accession | YP_002113286 |
Protein GI | 194738070 |
COG category | [R] General function prediction only |
COG ID | [COG4455] Protein of avirulence locus involved in temperature-dependent protein secretion |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.721979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.320198 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA CTGACACGCT TCCTGCTACC CTGTCCGCGC TGATACAGGA ATACTCTATT GCGGAGGGGA TTCAGATGGC GGAGCAGCAG GTTCGGGAAA ATCCGGCGAA AGCGCTCTGC CGCCACAGCC TGTTTCAGTT GCTGTGTGTG GCCGGAGACT GGTCGCGGGC GCTACACCAG CTTCAGCTAT GCGCCAGGAT GGAGGCCAAT TATACCCAGG AGGCCCGGCT GTACCGGGAG CTGGTTCGCT GCGAAATGTT CCGCCGCACC GTTTTTCAGG GTGAACAACG ACCCGGTTTT CTTCTGCCGC AGCCCGTTTG GGTGGAGTCA CTGCTGGCGG CACTCGCCTG TCATGACGAT ACCGGTGAGG TTGATAAACA CCGTAATACC GCACTGGAAG CCATAACAGA CACGGGCGGG CAGTGGAACG GCGGCGCATT TGACTGGGCG AGCGACAGCG ATTCCCGCCT TGGCCCGGTA CTTGAGCTGG TCACCGGCGG CGTGTATATC TGGCTACCGT TTTCGCAAAT ACGCTCGCTG GAATCGCCGC AACCGACGCG CCTGACCGAT CTGCTGTGGA AACCCATTAA TATCACCCTG ATGAATGGCG ATACGCACGG CGCCTGGCTC TTTACCCGTT ACAGCGGTTC GGAAAGTGCA TCTGACGCCC TGCGTCTGTG CCGGGAAACC GCCTGGCAGG ACGGCCCCGG CGAAACCACC GTGCGGGCGC TGGGGCAGAA AGTGTGGCTG ACCAGCCACG GCGATATCAG CCTGCTGGAC ATGGCCCATT GTACCTTTCA TGCTCAGGAA AACGATGGCG CATGA
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Protein sequence | MKKTDTLPAT LSALIQEYSI AEGIQMAEQQ VRENPAKALC RHSLFQLLCV AGDWSRALHQ LQLCARMEAN YTQEARLYRE LVRCEMFRRT VFQGEQRPGF LLPQPVWVES LLAALACHDD TGEVDKHRNT ALEAITDTGG QWNGGAFDWA SDSDSRLGPV LELVTGGVYI WLPFSQIRSL ESPQPTRLTD LLWKPINITL MNGDTHGAWL FTRYSGSESA SDALRLCRET AWQDGPGETT VRALGQKVWL TSHGDISLLD MAHCTFHAQE NDGA
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