Gene SeSA_A0286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0286 
Symbol 
ID6519420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp297900 
End bp298814 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content51% 
IMG OID642745447 
ProductLysR substrate binding domain protein 
Protein accessionYP_002113273 
Protein GI194737606 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.492247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA CCTCCGAAGA ACTTGCAATT TTTGTCGCTG TCGTGGAAAG CGGCAGCTTC 
AGCCGGGCGG CAGAGCAGCT TGGACAGGCC AATTCCGCTG TCAGCCGGGC AGTTAAAAAG 
CTGGAGATGA AGCTCGGCGT CAGTCTGCTT AATCGTACGA CCCGACAGCT GAGCCTGACT 
GAAGAAGGAG AGCGATACTT CAGGCGTGTG CAGCAGATAC TGCAAGAAAT GGCCGCTGCA 
GAAACGGAAA TCATGGAGTC GCGTAATACC CCGCGCGGCT TACTGCGTAT CGATGCGGCA 
ACGCCGGTAA TGCTGCATTT CCTGATGCCG CTGATTAAAC CTTTTCGTGA ACGGTATCCT 
GAAATAACGT TGTCTCTTGT CTCCTCAGAA ACGTTCATCA ATCTTATTGA ACGAAAAGTG 
GATGTTGCGA TACGCGCAGG CACGTTGACA GATTCAAGTC TGCGCGCGCG TCCGTTATTT 
ACCAGTTATC GTAAGATTAT CGCTTCACCG GATTATATTG CCCGTTTTGG CAAGCCAGAG 
ACCGTTGAAG AGTTAAAACG GCATCTGTGC CTGGGGTTCT CAGAACCTGT TTCGCTCAAT 
ACCTGGCCAA TAGCCTGTAG CGATGGGCAG CTCCATGAGG TTGAATGTGG GATTTCTTCC 
AACAGCGGGG AAACGTTAAA ACAACTTTGC CTGAACGGTA ACGGCATTGC ATGTCTTTCA 
GATTATATGA TTGATAAAGA GATCGCGCGG GGAGAACTGG TGGAACTGCT GGCCGATAAA 
CGTCTGCCGG TAGAAATGCC TTTCAGCGCC GTTTACTACA GCGATCGCGC CGTCAGCACA 
CGCATTCGGG CATTTATCGA CTTTTTGAGC GAATATATAA GAACAGCTCC CGAAGGAGCT 
GTGAAAGAGG GGTAA
 
Protein sequence
MKATSEELAI FVAVVESGSF SRAAEQLGQA NSAVSRAVKK LEMKLGVSLL NRTTRQLSLT 
EEGERYFRRV QQILQEMAAA ETEIMESRNT PRGLLRIDAA TPVMLHFLMP LIKPFRERYP 
EITLSLVSSE TFINLIERKV DVAIRAGTLT DSSLRARPLF TSYRKIIASP DYIARFGKPE 
TVEELKRHLC LGFSEPVSLN TWPIACSDGQ LHEVECGISS NSGETLKQLC LNGNGIACLS 
DYMIDKEIAR GELVELLADK RLPVEMPFSA VYYSDRAVST RIRAFIDFLS EYIRTAPEGA 
VKEG