Gene SeSA_A0269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0269 
SymbolproS 
ID6516920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp284886 
End bp286604 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content55% 
IMG OID642745433 
Productprolyl-tRNA synthetase 
Protein accessionYP_002113265 
Protein GI194735941 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0442] Prolyl-tRNA synthetase 
TIGRFAM ID[TIGR00409] prolyl-tRNA synthetase, family II 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.104419 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACTA GCCAATACCT GCTCTCCACT CTGAAGGAGA CACCTGCCGA CGCCGAGGTT 
ATCAGCCACC AGCTGATGCT GCGCGCCGGG ATGATCCGCA AGCTCGCCTC CGGGTTATAT
ACCTGGCTGC CGACCGGCCT GCGCGTCCTG AAAAAAGTCG AAAACATCGT GCGTGAAGAG
ATGAACAACG CCGGTGCTAT CGAGGTGTCG ATGCCAGTCG TTCAGCCAGC CGACCTGTGG
CAAGAGAGTG GTCGTTGGGA ACAGTACGGT CCGGAACTGC TGCGTTTTGT CGACCGTGGC
GAGCGTCCGT TCGTACTCGG CCCGACCCAC GAAGAAGTTA TCACCGATCT GGTGCGTAAT
GAACTCAGCT CTTATAAGCA GTTGCCGCTG AACTTCTTCC AAATCCAGAC CAAATTCCGT
GATGAAGTGC GTCCGCGCTT TGGCGTGATG CGTTCGCGCG AATTCCTGAT GAAAGATGCT
TACTCTTTCC ACACCTCTCA GGAGTCGTTG CAGGAAACCT ATGACGCCAT GTACGCCGCG
TATAGCCGTA TCTTCAGCCG TATGGGGCTG GATTTCCGCG CGGTACAGGC CGATACCGGT
TCTATCGGCG GCAACGCCTC GCATGAATTC CAGGTGCTGG CGCAAAGCGG CGAAGACGAT
ATCGTTTTCT CTGATGTTTC TGATTACGCG GCTAACATTG AACTGGCAGA AGCTATCGCG
CCGCAAACGC CGCGCGCAGC GGCGACGCAG GAAATGACTC TGGTCGATAC GCCAAATGCC
AAAACCATCG CGGAGCTGGT GGAACAGTTC AACCTGCCAA TTGAAAAAAC GGTAAAAACG
CTGCTGGTGA AAGCGGCGAA AGACAGCAAG TCTCCGCTGG TGGCTCTGCT GGTTCGCGGC
GATCATGAAC TGAATGAAGT TAAAGCGGAA AAACTGCCGC ACGTTGCCAG CCCGCTGACC
TTCGCTACCG AAGAAGAGAT TCGCGCCGTA ATTAATGCCG GCCCTGGCTC CCTCGGCCCG
GTCAATATGT CGATTCCGGT CATCATCGAT CGTACCGTTG CCGCCATGAG CGATTTTGCC
GCTGGCGCCA ACATCGACGG TAAACACTAC TTTGGTATTA ACTGGGATCG CGATGTGGCG
ACGCCTGTTG TTGCCGACAT CCGTAACGTA GTCGCCGGCG ATCCGAGTCC GGATGGTCAG
GGAACGTTGC TTATCAAACG CGGTATCGAA GTGGGTCACA TCTTCCAGTT AGGTACCAAG
TACTCAGAAG CGCTGAAAGC CTCCGTTCAG GGTGAAGATG GCCGTAACCA GATCCTGACA
ATGGGCTGCT ATGGTATCGG CGTAACACGT GTCGTTGCCG CGGCTATCGA GCAGAACTTT
GACGAGCGCG GCATTGTATG GCCTGACGCC ATTGCGCCTT TCCAGGTCGC TATTCTGCCG
ATGAATATGC ACAAATCCTT CCGTGTGCAG GAGCTGGCGG AAAAGCTGTA CAGCGAATTG
CGCGCGCAGG GCATTGAAGT GCTGATGGAC GACCGTAAAG AGCGCCCGGG CGTGATGTTT
GCCGATATGG AGCTGATTGG TATTCCACAT ACTATCGTGA TTGGCGATCG CAACCTGGAT
AACGACGATA TTGAGTATAA ATACCGTCGT AGCGGTGAAA AATCGCTGAT TAAAACCGGC
GATATCGTTG ATTATCTGGT CAAGGCGATT AAAGGCTAA
 
Protein sequence
MRTSQYLLST LKETPADAEV ISHQLMLRAG MIRKLASGLY TWLPTGLRVL KKVENIVREE 
MNNAGAIEVS MPVVQPADLW QESGRWEQYG PELLRFVDRG ERPFVLGPTH EEVITDLVRN
ELSSYKQLPL NFFQIQTKFR DEVRPRFGVM RSREFLMKDA YSFHTSQESL QETYDAMYAA
YSRIFSRMGL DFRAVQADTG SIGGNASHEF QVLAQSGEDD IVFSDVSDYA ANIELAEAIA
PQTPRAAATQ EMTLVDTPNA KTIAELVEQF NLPIEKTVKT LLVKAAKDSK SPLVALLVRG
DHELNEVKAE KLPHVASPLT FATEEEIRAV INAGPGSLGP VNMSIPVIID RTVAAMSDFA
AGANIDGKHY FGINWDRDVA TPVVADIRNV VAGDPSPDGQ GTLLIKRGIE VGHIFQLGTK
YSEALKASVQ GEDGRNQILT MGCYGIGVTR VVAAAIEQNF DERGIVWPDA IAPFQVAILP
MNMHKSFRVQ ELAEKLYSEL RAQGIEVLMD DRKERPGVMF ADMELIGIPH TIVIGDRNLD
NDDIEYKYRR SGEKSLIKTG DIVDYLVKAI KG