Gene SeSA_A0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0260 
Symbol 
ID6517881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp276708 
End bp278369 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content55% 
IMG OID642745424 
Productbasic endochitinase 
Protein accessionYP_002113256 
Protein GI194734671 
COG category[R] General function prediction only 
COG ID[COG3979] Uncharacterized protein contain chitin-binding domain type 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.361835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTA ACGCCAGCGA TCTGGCGGCG AAAGAGAAAG CGCTGACGGA TTTTCCGTTA 
ATGGAGGCAG TGAAATCCTC TATCCAGACG TTGGATAACA GCGCGGTCGA ACAAATCGAA 
CCGGGGCGCG CCGCTAACCC GGCAAACGTA AAACGCGTTG AAAGTATTCT GAAAGAGGCC 
GACTGGGATT ATCTGTTCCC GATGCGCGCG CCGGAATATA CTTACTCTAA CTTCCTGAAA 
GCGATAGGTA AATTCCCGGC GGTTTGTGGT ACCTACACCG ATGGACGCGA TAGCGACGCT 
ATCTGCCGTA AAACCCTGGC TACTATGTTT GCGCATTTTG CCCAGGAGAC GGGCGGTCAC 
GAAAGCTGGC GTGACATTCC GGAATGGCGT CAGGCGCTGG TCTATCTGCG CGAAGTCGGC 
TGGACTGAAG GGCAGAAAGG CGGCTACAAC GGCGAATGTA ACCCGGATGT ATGGCAGGGC 
CAGACCTGGC CGTGCGGTAA AGATAAGGAC GGCGATTTCC TCAGCTATTT TGGTCGCGGG 
GCAAAACAGC TTTCTTATAA CTACAACTAT GGGCCTTTCT CTGACGCGAT GTATGGCGAC 
GTTCGCCCTC TGCTGGATAA ACCCGAGCTG GTGGCGGATA CCTGGATGAA CCTGGCGAGC 
GCCGTCTTCT TCTTTGTGTA TCCGCAGCCG CCGAAGCCGT CTATGCTACA TGTGATTGAC 
GGTACCTGGC AGCCAAACGA TCGCGATAAA GCAAACGGCC TGGTATCAGG TTTCGGCGTC 
ACCATTCAGA TCATCAATGG CGGCGTGGAG TGCGGCGGTG CAGATGAGAA TGCGCAGTCG 
CTTAACCGTA TTGCCTACTA CAAAGAGTTT GCCAACTACC TGAAAGTGCC GGTGCCGGCT 
GACGAAGTGT TGGGCTGTAA AAAGATGAAG CAGTTCGATG AAGGCGGCGC TGGCGCGTTA 
CCGATCTATT GGGAACAAGA CTGGGGCTGG AGCGCCGATA CTGCGGACGG TAAAACCTAT 
TCCTGCCAGT TAGTGGGATA TCAGACGCCG TATACCGCCT TTAAAGAGGG CGACTACACG 
AAATGTGTAC AGCATTATTT CAACGTTAAT GTCGTCGATG ATAACGGAAC CACTGAACCG 
GATGTCACGC CAACTCCGGC GCCAGTGACG GATGAAAACG TGGCGCCCGT CGCGCGCATT 
GCCGGGCCGG TCGGGGCGGT GGAAGCCGGT AGCCCGGTTT CACTCAGCGC GGAAGGATCG 
ACCGACGCGA ATGGCGACAA GCTCACCTAT ACCTGGATGT CGCAGGATGG CAAAACGCTG 
AGCGGCCAGG ATAAAGCCGT TGTGATTTTC AACGCGCCGG ATGTCACTCA GAACACCCAG 
TATGTGGTGA ATCTGACCGT TAGCGACGGT ACGCTCTCCA GCACTGCGGT TTATACGCTG 
AATGTGAAAG CGAAGGCCGC CGCTGCGGAT GACGAAGATA AGACCACCAG CTACCCTGCC 
TGGAGCAGCA GCCAGAAATG GAATCCGGGC GACATCGTCA ACAATAATGG CGCATTGTAC 
CAGTGCAAAC CGTTCCCGGA AGGCTCATGG TGTAATGTTG CGCCTGCCTA CTATGAGCCC 
GGCGTAGGGA TTGCCTGGGC CGATGCATGG AACGCATTGT AA
 
Protein sequence
MTINASDLAA KEKALTDFPL MEAVKSSIQT LDNSAVEQIE PGRAANPANV KRVESILKEA 
DWDYLFPMRA PEYTYSNFLK AIGKFPAVCG TYTDGRDSDA ICRKTLATMF AHFAQETGGH 
ESWRDIPEWR QALVYLREVG WTEGQKGGYN GECNPDVWQG QTWPCGKDKD GDFLSYFGRG 
AKQLSYNYNY GPFSDAMYGD VRPLLDKPEL VADTWMNLAS AVFFFVYPQP PKPSMLHVID 
GTWQPNDRDK ANGLVSGFGV TIQIINGGVE CGGADENAQS LNRIAYYKEF ANYLKVPVPA 
DEVLGCKKMK QFDEGGAGAL PIYWEQDWGW SADTADGKTY SCQLVGYQTP YTAFKEGDYT 
KCVQHYFNVN VVDDNGTTEP DVTPTPAPVT DENVAPVARI AGPVGAVEAG SPVSLSAEGS 
TDANGDKLTY TWMSQDGKTL SGQDKAVVIF NAPDVTQNTQ YVVNLTVSDG TLSSTAVYTL 
NVKAKAAAAD DEDKTTSYPA WSSSQKWNPG DIVNNNGALY QCKPFPEGSW CNVAPAYYEP 
GVGIAWADAW NAL