Gene SeSA_A0248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0248 
SymbolrseP 
ID6516109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp263415 
End bp264767 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content53% 
IMG OID642745414 
Productzinc metallopeptidase RseP 
Protein accessionYP_002113246 
Protein GI194735257 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0750] Predicted membrane-associated Zn-dependent proteases 1 
TIGRFAM ID[TIGR00054] RIP metalloprotease RseP 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGTA TTCTCTGGAA TCTGGCTGCA TTCATCATCG CACTGGGCGT GCTGATCACT 
GTGCATGAAT TTGGTCATTT CTGGGTTGCC CGGCGCTGCG GTGTGCGAGT TGAGCGCTTT
TCCATCGGCT TTGGCAAAGC GCTTTGGCGT CGTACCGATC GGTACGGCAC CGAGTATGTC
ATCGCCCTGA TCCCGCTGGG CGGCTACGTC AAAATGCTGG ATGAACGCGC CGAACCGGTA
GCGCCGGAAT TGCGTCGTCA CGCCTTCAAT AACAAAACGG TGGGCCAGCG CGCCGCAATT
ATTGCCGCAG GTCCGGTTGC GAACTTCATT TTTGCTATCT TTGCTTACTG GCTGGTCTTT
ATCATCGGCG TCCCTGGCGT TCGTCCGGTC ATTGGCGAAA TAACGCCCAA CTCGATTGCT
GCGCAGGCGC AAATTGCGCC TGGTACGGAA CTTAAAGCCG TTGATGGTAT CGAAACCCCT
GATTGGGATG CCGTGCGTTT ACAACTGGTG TCCAAAATTG GCGATCAGCA GACGACGGTG
AGCGTCGCGC CGTTTGGCAG CGACCAGCGG CAGGACAAAA CGCTTGATTT ACGTCACTGG
GCATTTGAGC CTGATAAGCA AGATCCTGTA TCTTCTTTAG GGATTCGGCC CCGCGGGCCA
CAGATTGAAC CGGTACTGTC AGAAGTGCAG GCGAATTCCG CAGCCAGTAA AGCGGGTTTG
CAAGCGGGCG ACAGGATCGT TAAAGTCGAT GGTCAGCCGT TAACGCAGTG GATGAAATTC
GTGACGTTTG TACGCGATAA TCCCGGTAAG CCGTTAGCGT TAGAGATTGA AAGGCAGGGG
AGCGCCTTGT CGTTGACGTT AACGCCGGAT ACGAAATCGG TTAACGGAAA GGCGGAAGGG
TTTGCAGGCG TGGTGCCTAA AATTATTCCT CTGCCGGAAG AGTACAAGAC TATACGCCAG
TATGGGCCTT TTAGCGCCAT CCTCGAAGCC ACGGATAAGA CGTGGCAGTT GATGAAGCTG
ACGGTCAGTA TGCTGGGTAA ATTGATAACC GGTGATGTGA AACTGAACAA CCTCAGTGGG
CCGATTTCTA TCGCTCAGGG GGCTGGGATG TCAGCGGAGT TCGGGGTGAT TTATTACCTG
ATGTTCCTTG CGCTAATCAG CGTGAACTTA GGGATAATTA ACCTGTTTCC GCTGCCCGTT
CTTGACGGGG GTCATCTGCT GTTCCTGGCG ATTGAAAAGC TTAAGGGCGG GCCGGTATCC
GAGCGGGTTC AAGACTTTAG TTATCGCATT GGCTCGATTT TGCTGGTGTT GTTAATGGGG
CTTGCACTTT TCAATGATTT CTCTCGGTTG TAA
 
Protein sequence
MLSILWNLAA FIIALGVLIT VHEFGHFWVA RRCGVRVERF SIGFGKALWR RTDRYGTEYV 
IALIPLGGYV KMLDERAEPV APELRRHAFN NKTVGQRAAI IAAGPVANFI FAIFAYWLVF
IIGVPGVRPV IGEITPNSIA AQAQIAPGTE LKAVDGIETP DWDAVRLQLV SKIGDQQTTV
SVAPFGSDQR QDKTLDLRHW AFEPDKQDPV SSLGIRPRGP QIEPVLSEVQ ANSAASKAGL
QAGDRIVKVD GQPLTQWMKF VTFVRDNPGK PLALEIERQG SALSLTLTPD TKSVNGKAEG
FAGVVPKIIP LPEEYKTIRQ YGPFSAILEA TDKTWQLMKL TVSMLGKLIT GDVKLNNLSG
PISIAQGAGM SAEFGVIYYL MFLALISVNL GIINLFPLPV LDGGHLLFLA IEKLKGGPVS
ERVQDFSYRI GSILLVLLMG LALFNDFSRL