Gene SeSA_A0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0236 
Symbol 
ID6516091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp250369 
End bp251670 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content51% 
IMG OID642745403 
Productshikimate transporter 
Protein accessionYP_002113235 
Protein GI194734221 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGAA CGTATAATGC TACTATTCGC CGGGTGGTGA TTTCCGCCTG GATAGGAAAC 
TCCATTGAAT ATTATGATTT TCTATTATAC GGCCTGGCAA GCGCGCTGGT ATTTGGCCCG 
CTTTTTTTCC CTGGCGCCAG CCCATTGACT GCAACGTTAT CTTCTTTTGC CAGTTTCGGC 
GTGGGATTTA TTTCCCGGCC GCTGGGCGCG CTATTTTTTG GCAACAGGGG AGATACGCTT 
GGGCGTAAAA ACACGTTATT AATCACGTTA GGTGGGATGG GCGCGGTCAC GTTTCTCATC 
GGTTGCCTGC CTTCTTACGC CAGTATTGGC GCGCTGGCGC CTGCCTTACT GGTTATTCTG 
CGTTTTCTGC AGGGATTTAT GGTTGGAGGC GAATGGGGAG GCGCCATGTT AATGGTCGTG 
GAATATGCTG CTGGAAAGCA CCGGGGGCGG TTAAGCGCGC TATCGCAAAC AGGAGGACTC 
ACGGGACAAT TATTGGCGAC AGGCGCATTT ATAGTCGTGA CCCAATTACC GAAGGATGCG 
TTGTTATTGT GGGGATGGCG TATTCCTTTT CTGCTCAGTG CGCTTTTGGT GCTGCCTGGA 
TTATATATGC GTCATCGTCT GGATGAGACG CCTGTCTTCC GTGCGTTTAA AAAGCAGCAG 
GCCATTAAGC ATATGCAGCA AAAAGAAGAA AGGCCGGTGG TCAAAGTGGT ACGAGAACAA 
TGGCGCAGCA TTTTGCTGAT TATAATTCTA CGTTTTGCGG AAAGCGTTCC CTTTTTTCTT 
GCCACCGTCT TCGCGGTTTC CTGGGCGACG ACGCAGCTTG GGATTGCCAG CCTGACTATT 
CTGTACATTG TAATGTTCAC CTGTCTGCTG GCGTATCCCA TGCACGTGCT ATTTGGCATC 
ATGTCGGATC GGCGTGGCTG CCGTCAGGTG TATATTTTCG GCGCGCTTTT TGTCGCGGCA 
ATGGCTTTTC CCTTTTTCTG GCTACTGGAA AGCCGTTCGC TCATACTGAT GACAATGGGC 
TACGTTTTGC TTATTAACAT TGGTCATAAT TCACTGAATG CCGTGCAACC TTCTTTTTTC 
GCCGGACTGT TTCATCCGCC TGTACGCTAC AGCGGTTCAT CAATTGGCGC TCAGTTGGGG 
GCGGTTGTGG CAGGGGGATT CACGCCGTTT ATCGCTAAAG CGTTAAGCGC AGTCTATGAT 
AACAGTTGGA CTTTGGTTGC CGGTTATGTC GTTTTGACGG CGTTGGCTTC GGCATTTGCG 
GCAAAGATTG CGCCGGAAAC CGTGTTACCG CATTCGCCGT AA
 
Protein sequence
MSGTYNATIR RVVISAWIGN SIEYYDFLLY GLASALVFGP LFFPGASPLT ATLSSFASFG 
VGFISRPLGA LFFGNRGDTL GRKNTLLITL GGMGAVTFLI GCLPSYASIG ALAPALLVIL 
RFLQGFMVGG EWGGAMLMVV EYAAGKHRGR LSALSQTGGL TGQLLATGAF IVVTQLPKDA 
LLLWGWRIPF LLSALLVLPG LYMRHRLDET PVFRAFKKQQ AIKHMQQKEE RPVVKVVREQ 
WRSILLIIIL RFAESVPFFL ATVFAVSWAT TQLGIASLTI LYIVMFTCLL AYPMHVLFGI 
MSDRRGCRQV YIFGALFVAA MAFPFFWLLE SRSLILMTMG YVLLINIGHN SLNAVQPSFF 
AGLFHPPVRY SGSSIGAQLG AVVAGGFTPF IAKALSAVYD NSWTLVAGYV VLTALASAFA 
AKIAPETVLP HSP