Gene SeSA_A0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0234 
Symbol 
ID6517149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp246581 
End bp249550 
Gene Length2970 bp 
Protein Length989 aa 
Translation table11 
GC content54% 
IMG OID642745401 
Productviral enhancin protein 
Protein accessionYP_002113233 
Protein GI194735270 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGG AAATCACGCT AACATGTTAT TCGCTGCCTG CGGCCCCCGG ACTGGATAAC 
ATCAAATTTG AAAAGGGGCG CGAGCACGAC CGCCAGGCGC TGGGATTTAT TCTGCCAGCG
AATACGCAGC TGCAAATCCG CCAGCCAAAT AACAACGCCG GTAACGCCAG ACTCCGTCTG
CTGTGCAATG ACTCAGCGTG TGAGAAATCG CTTACGCTGA ACGGCAACTG GCAAACGATC
AGCACAACGG TCGATTCCGT TCCCTTTATT GATACCCTCT TTTTTGCGCA GGGCGGCGAG
TTTTCGGTGA TCTACCGACA GCCAACCAGC AATAAAAATT TGCCACACTG GCGTAAGGGG
CAATCCGAAG ACACTTTTTT CCAGACCTGG GAAGAACAGG CGTCGCCTTT TGCCCTACTG
GAACTGGACC GCGTGCGTTT TCTGCTGCCC TGGGCGGATC GCGCTAATGT CATCAACGCC
GGTATCACCG CGCTGGATGC GTACTATACG CGAGTGATCG ACGCCTATAA TGACTGGACT
GGTCTCAGCG ATAGCCCTGC TTCGCCGCTT AATCAAAATG TCGCTAACCG CTATTTTATT
AAAGCGGATA AACACGGCGT CGGCGCGGCT TATTATCTCC CCTGGTGGTG CGCGCAAACG
GCAGCAACAT TAAGCCAGGG GTGGATCGAT AATGTCGCCA CGCAGTGGAC GATTCTGCAT
GAAATCGGTC ACGGCTATCA GGGCGTCTTT ATGAATGACG TCGACCTGCC AGTCGGTGAG
GTGTGGAACA ACATTTACGC CGCGTTTTTC CAGCAGCTTA ACCTGAACCA GGGGAACCAT
CTTTATACCG ACGGCTGGCT CTATGATTAC GGGCGGCAGC CTGAGCAGGA GTTGCAATTC
ATTACCCATC TGCGGAATCG CACGCCGATT AGCGCCTGGG GCGTCCGACC CCGTCTGCAA
TTTCTGATGC TGATGTTATT TAAAGGCGGA ACAGAAGCCT TCCGGGTGTT TAACCAGAAC
TACCGCGCGC TGGGTGCTGG CGAAAACTTT TTGCCCTGCG AGCATCGCCT GACCGATCTG
CTGGCGGACG CCATCGCCAC AGCCTCAGGT TATGACGTCG CGCCGTTTAT TCAGCTGTGC
GGCTTACCGG TCGATGCGTT CACCCGCGAG CAGATCGCCG CACAGGCGGT AAAACCCGTC
TGGCCGCTTT ACGATCTGCT GCCGGAGCGC GAATGGGAAA GCGCGCGCCA ACAGTTGGGG
CTGGACTCTT TTGTCTGGCT GGTTGAAAAC GCCGAGCTGG CGGCGCTGAA CAAAACGGGA
ACGCTCACGC TAACGCTGAA TATCGATCAG CCGGAGCAAC TTTATGGACG CGCCTTAACG
CTACACGACA ACGCCGGCAA CACGTATACA TTGACCGTCA ACGACAGTAC GCTCACGTTA
ACGCCCCTGC CCATTGGCAT TTACCATCTC ACCCTGCCCA AAGGGCGATC GCAGAAATAC
CGCCCGGACA CGGACTATGT GGTTATCCGC GAAGGGGAAA ACGCACTTAC CGTTAATTTC
ACCGTCTTGC AGGACAGCGC CGCGCATAAC GAGCAGTTGA TTTTCCTCGG CTACGGTGAC
ATGCCCTTCG CCCGTTTGGC CGTGGATCAT GAGGCCAGAC AATTAGTTCT GGATATCACG
AACGCCACGC CGCACAGCTA CTTCGCGAAT ACCTTATACG CCAGCATAAC GGTGTTAACC
GCCAGCGGCG AAAAGGTTTT TGAACGTAAG ATGAACGGAA CAAACTGCGC CACCGAAAAA
ATTGTGGTAC CGTTTAGCGA CCACTACCAC CTTTATCTTT ATCATGCCGA GCCTGGCCGC
CTGAAAGCCT CGCCGGGCTA TCTGACATTG GTCTCGTCGA CGAAATATCA GTTACTGCGT
CTTGATAGCG AAGGGCTTTA TCATTTTTCG CTCAACAACG ATCCTGCCGC AGATCTCCAG
GCTATGTTTA TCCATCGCGC AGATGCTATC CGCGCCTGCC CTTCATTGAT GGCGCAACCT
TATGCCGCTT GCAAAAACGA TCTCTGGCTG ATGCTCTCCC ACATTGAAGA GCCGACCCGT
AGCGCGTTAA TGCGCGACAG CGTTGATGTG CTGCCGACGG ATAACAGCGA GCCGGGCGAA
GGCATCGGTA AAGGCGTGAC GTTGCAGTTA CGCGGACAAG GCGACAGAAC GTTTTGCCAG
CTTGCTTACG ATAATCGGCA ACAGCGCATG ACAATAGAAA CACTGGCCGG GCAGCCTCAT
CCCTACTATA CCGCGACATA CAGCACGCTC ACGGTGAAGG AGGAGTCCGG CGTGGTTATC
TATAGCCGTC ATTATGATGG CATCACCCAC TATTCAGCCG ATAGCGATAC GGTTGTTTTG
CAAGCGGGAA TGTACATTGA GCTCTTCCAT GACGAACCTT ACCGTTGCAA CGCCATCAAT
GAAACGACCG GGCAAAACGT CACGCTGAAA AAACACAACC GCTGGCGCGT GGTGAGCGAT
GGGCTGGAGG TCGACTCACC GGAACAAACG GAAGAGAAAA ATACCTCCGA TGCTGCCGCA
TTATATGGCG ATAAATTCAG CTGGCAGCTT ATTGGCAAGG AAGAAAATGG TTTTGCCAGT
ATGGAAATAG ACATCCGTGC GCAACAATTT ATCTTTACCG CATACCCAAT TGTGCCGCAT
AGCGACTTCG CAACGGAATA TGCGGCAGTG ACGATTTATA ATACGCGCGG TACGGTGGTT
TACCGTCAGT CGATAAAAGG TTCAGTGCAG CTTGGCGGCT ATACTGACGT CTGCGGGCTG
GATGAGGATT ATACGATTGA GGTCTTTCAT GCCGAGGGCG CAGACCAGTC GGTTATCCGC
AACCCGCTCA ATGGCGAAAG CTGGCCGCAG CCGCAACACG TGATCTGGCA GGTCACGGCG
CGGGGATTGC AGCGCCTGAC CACGAATTAA
 
Protein sequence
MTQEITLTCY SLPAAPGLDN IKFEKGREHD RQALGFILPA NTQLQIRQPN NNAGNARLRL 
LCNDSACEKS LTLNGNWQTI STTVDSVPFI DTLFFAQGGE FSVIYRQPTS NKNLPHWRKG
QSEDTFFQTW EEQASPFALL ELDRVRFLLP WADRANVINA GITALDAYYT RVIDAYNDWT
GLSDSPASPL NQNVANRYFI KADKHGVGAA YYLPWWCAQT AATLSQGWID NVATQWTILH
EIGHGYQGVF MNDVDLPVGE VWNNIYAAFF QQLNLNQGNH LYTDGWLYDY GRQPEQELQF
ITHLRNRTPI SAWGVRPRLQ FLMLMLFKGG TEAFRVFNQN YRALGAGENF LPCEHRLTDL
LADAIATASG YDVAPFIQLC GLPVDAFTRE QIAAQAVKPV WPLYDLLPER EWESARQQLG
LDSFVWLVEN AELAALNKTG TLTLTLNIDQ PEQLYGRALT LHDNAGNTYT LTVNDSTLTL
TPLPIGIYHL TLPKGRSQKY RPDTDYVVIR EGENALTVNF TVLQDSAAHN EQLIFLGYGD
MPFARLAVDH EARQLVLDIT NATPHSYFAN TLYASITVLT ASGEKVFERK MNGTNCATEK
IVVPFSDHYH LYLYHAEPGR LKASPGYLTL VSSTKYQLLR LDSEGLYHFS LNNDPAADLQ
AMFIHRADAI RACPSLMAQP YAACKNDLWL MLSHIEEPTR SALMRDSVDV LPTDNSEPGE
GIGKGVTLQL RGQGDRTFCQ LAYDNRQQRM TIETLAGQPH PYYTATYSTL TVKEESGVVI
YSRHYDGITH YSADSDTVVL QAGMYIELFH DEPYRCNAIN ETTGQNVTLK KHNRWRVVSD
GLEVDSPEQT EEKNTSDAAA LYGDKFSWQL IGKEENGFAS MEIDIRAQQF IFTAYPIVPH
SDFATEYAAV TIYNTRGTVV YRQSIKGSVQ LGGYTDVCGL DEDYTIEVFH AEGADQSVIR
NPLNGESWPQ PQHVIWQVTA RGLQRLTTN