| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0233 |
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| Symbol | cdaR |
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| ID | 6518071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 245302 |
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| End bp | 246459 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642745400 |
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| Product | carbohydrate diacid transcriptional activator CdaR |
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| Protein accession | YP_002113232 |
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| Protein GI | 194735751 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGCT GGCATCTTGA TACCAAAATG GCGCAGGATA TCGTGGCGCG CACTATGCGC
ATCATCGATA CCAATATCAA CGTAATGGAT GCCCGCGGGC GTATTATCGG CAGCGGCGAT
CGGGAACGTA TTGGTGAATT GCACGAAGGC GCGCTGTTAG TGCTGTCGCA GGGCCGGGTT
GTGGATATCG ACGACGCCGT GGCGCGACAC CTGCACGGGG TACGTCAGGG GATTAATCTT
CCCTTACGCC TTGAGGGCGA AATTGTCGGC GTGATCGGTC TCACCGGCGA ACCAGAGCAT
CTGCGTAAAT ATGGCGAACT GGTGTGTATG ACTGCCGAAA TGATGCTGGA GCAGTCGCGG
TTAATGCACC TTTTGGCGCA GGATAGCCGT TTGCGCGAAG AGCTGGTGAT GAACCTGATT
CAGGCCGAAG AAAATACGCC GGCGCTGGTG GAATGGGCGC AGCGTTTGGG GATCGATTTG
AACCAGCCAC GTGTGGCGGC GGTGGTGGAA GTCGATAGCG GCCAGCTTGG CGTCGATAGC
GCAATGGCGG AACTTCAGCA GTTGCAGAAT GCGCTTACCA CGCCGGAGCG TAACAACCTG
ATAGCCATTG TGTCTCTCAC CGAGATGGTG GTGCTCAAAC CCGCTTTAAA CTCGTTTGGT
CGTTGGGATG CTGAAGATCA TCGTAAGCGC GTAGAGCAGC TTATCTCGCG AATGAAAGAG
AATGGTCAGC TACGTTTTCG CGTGGCGCTG GGCAATTACT TTACCGGGCC GGGCAGTATT
GCACGCTCAT ACCGCACGGC GCGCACCACG ATGATGGTCG GCAAACAGCG GATGCCAGAA
AGCCGCAGCT ATTTTTATCA GGATTTGATG CTGCCGGTTC TGTTAGATAG CCTGCGTGGC
GGCTGGCAGG CCAATGAGCT GGCGCGCCCG CTGGTAAAAC TCAAAGCGAT GGATAACAAC
GGATTATTAC GTCGGACGCT GACGGCGTGG TTTCGCCATA ATGTCCAGCC GCTGGCGACC
TCTAAGGCGC TGTTTATTCA TCGTAACACG CTGGAATATC GGCTAAATCG TATTTCGGAA
CTGACCGGGC TGGATTTGGG AAATTTTGAC GATCGGCTGT TGCTGTATGT GGCGCTACAA
CTGGATGAAC AGCGTTAA
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| Protein sequence | MAGWHLDTKM AQDIVARTMR IIDTNINVMD ARGRIIGSGD RERIGELHEG ALLVLSQGRV
VDIDDAVARH LHGVRQGINL PLRLEGEIVG VIGLTGEPEH LRKYGELVCM TAEMMLEQSR
LMHLLAQDSR LREELVMNLI QAEENTPALV EWAQRLGIDL NQPRVAAVVE VDSGQLGVDS
AMAELQQLQN ALTTPERNNL IAIVSLTEMV VLKPALNSFG RWDAEDHRKR VEQLISRMKE
NGQLRFRVAL GNYFTGPGSI ARSYRTARTT MMVGKQRMPE SRSYFYQDLM LPVLLDSLRG
GWQANELARP LVKLKAMDNN GLLRRTLTAW FRHNVQPLAT SKALFIHRNT LEYRLNRISE
LTGLDLGNFD DRLLLYVALQ LDEQR
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