| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0217 |
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| Symbol | hrpB |
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| ID | 6516186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 224941 |
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| End bp | 227415 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642745385 |
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| Product | ATP-dependent RNA helicase HrpB |
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| Protein accession | YP_002113217 |
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| Protein GI | 194736469 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.976044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACAAT GCGGCGCAAA GAAAGTTAAC CCCGTGGAGC CGTTTGTGAC GTCATTGCCC
GTTGCCGCCG TATTGCCTGA ATTGTTGACA GCCCTAAAAA CCGCGCCGCA GGTTTTGTTG
TCCGCGCCTA CCGGGGCGGG GAAATCCACC TGGCTGCCGT TGCAACTCCT GCAACAAGGT
CCGGTTGCTG GAAAAATCCT CCTGCTTGAA CCGCGTCGTC TGGCGGCGCG TAATGTCGCG
CAGCGTCTGG CGGAAGCGTT GAATGAAAAG CCTGGCGAAA CGGTAGGTTA CCGGATGCGC
GCGCAAAGCT GCGTGGGGCC GCGTACCCGG CTGGAAGTAG TGACAGAAGG CGTATTGACC
AGAATGATTC AGCGCGATCC CGAATTACGC GGCGTGGGGC TGGTGATACT GGATGAGTTT
CATGAGCGCA GTTTACAGGC GGATTTAGCG TTGGCGCTGT TGCTGGATAT CCAGCAAGGG
CTTCGTGACG ATCTCAGGCT GTTAATCATG TCTGCGACGC TGGATAACGA CAGGCTCTGT
CAGAGACTGC CTGATGCGCC GACGATCGTC TCGGAGGGGC GCGCGTTCCC GGTAGAGCGA
CGTTATCAGC CGCTCGCGGC GCATTTGCGT TTTGATGAAG CCGTCGCGAT GGCGACAGCG
GAACTGCTGC GCCATGAAAA CGGTTCGCTG CTGCTATTTT TACCCGGCGT AGGCGAAATA
CAGCGCGTTC ATGAACATCT GGCGTCGCGG GTAGGGAGTG ATGTCCTGCT TTGTCCGCTG
TATGGCGCAT TGTCTCTGGA AGCGCAACGC AAAGCGATTG TTCCCGCACC CGCCGGGATG
CGTAAAGTGG TGTTGGCGAC TAACATTGCC GAAACCAGTT TGACGATTGA AGGGATTCGT
CTGGTCGTCG ATAGCGCTCA GGAGCGCGTG GCGCGATTCG ACGCGCGAAC GGGACTGACG
CGGCTGGTTA CGCAGCGTAT CAGTCAGGCG TCAATGACGC AGCGCGCGGG GCGCGCCGGA
CGACTGGCGC CGGGAATCTG TTTACATCTG CTGGCCAAAG AACAGGCGGG GCGGGCGGCG
GCGCAAAGCG ATCCGGAAAT CTTACACAGC GACCTCTCCG GTTTGTTGAT GGAAGTGTTG
CAGTGGGGAT GTCACGATCC GGCATCGCTT TTCTGGCTGG ACAGGCCGCC GGAGGTGAAT
CTTCAGGCCG CCCGCCGTTT ATTATTGATG TTAGGCGCGC TGGAGGGCGA GCGATTAAGC
GCGCGCGGGC AGAAAATGGC GGCAACAGGT AACGAGCCGC GCCTGGCGGC GATGTTAGTC
AACGCCGGCG AGGGCGATAG CGCCGCCACC GCCGCCATGC TCGCGGCCAT CCTTGAGGAC
CCGCCGCGCG GCGGCGGTAC GGATTTAAGC GTGCTATTTT CGCGGCGACA GCCGGGCTGG
CAGCAGCGTA GCCAGCAGCT TTTAAAACGG CTGCAGGTGC GTAATGGCGA GCCGGATAGC
GCGCTTATTA TGCCGCTATT GGCCAGAGCG TTTAGCGACC GCATCGCGCG GCGTCGTGGT
CAGGAAGGGC GCTATCAGTT AGCCAATGGT ATGGGCGCGA TGTTAGATGC GGATGACGCG
TTGGGACGTC ATGAATGGCT GATCGCGCCG CTGTTGCTGC AAGGTAGCGC CTCGCCGGAC
GCCCGAATAT TGTTGGCGCA GCCGCTGGAT ATCGCCTCGC TGATTCAGGC GTGTCCTGAT
TTACTGCGCC AGTCTGACAC GGTTGAATGG GACGAAGCGC AGGGAACGTT GAAAGCGTGG
CGCAGAATGC GTATTGGACA GTTGACGGTT AGCGTTCAGC CACTGGCGAA GCCGTCTGAA
GAGGAGCTTC ATCAGGCGAT GCTGAACGGC ATCCGCGATA AAGGTCTGGC CGTCCTTAAC
TGGACGCCGG AAGCGGAGCA GTTCCGTCTG CGTCTGCACT GTGCGGCGAA ATGGCTGCCG
GAATATGACT GGCCTGCCGT GGACGAGGCG TCGCTGCTGG CGACTCTGGA AAACTGGTTG
CTGCCGCACA TGACAGGCGT ACAGTCGTTA CGGAGTCTGA AATCTCTGAA TGTGACTCAG
GCGTTACGGG GACTGCTTGA CTATGCCATG CTGCAACGTC TGGATAGTGA ACTGCCTGGG
CATTACACTG TGCCGACGGG AAGCCGAATA ACGATTCGTT ATCATGAAGA TAACCCGCCC
GCTCTGGCGG TCAGAATGCA GGAAATGTTT GGCGAAGCGA AGACTCCAAC CATCGCTCAG
GGCCGCGTGC CGCTGGTGCT GGAGCTGCTT TCGCCTGCGC AGCGACCGCT ACAGATTACG
CGCGATTTAA GCGCTTTCTG GCAGGGGGCG TATCGCGAAG TGCAAAAAGA GATGAAGGGT
CGTTACCCCA AACATGTCTG GCCGGACGAT CCGGCGAATA CGGCCCCAAC GCGGCGCACG
AAGAAGTATT CGTGA
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| Protein sequence | MLQCGAKKVN PVEPFVTSLP VAAVLPELLT ALKTAPQVLL SAPTGAGKST WLPLQLLQQG
PVAGKILLLE PRRLAARNVA QRLAEALNEK PGETVGYRMR AQSCVGPRTR LEVVTEGVLT
RMIQRDPELR GVGLVILDEF HERSLQADLA LALLLDIQQG LRDDLRLLIM SATLDNDRLC
QRLPDAPTIV SEGRAFPVER RYQPLAAHLR FDEAVAMATA ELLRHENGSL LLFLPGVGEI
QRVHEHLASR VGSDVLLCPL YGALSLEAQR KAIVPAPAGM RKVVLATNIA ETSLTIEGIR
LVVDSAQERV ARFDARTGLT RLVTQRISQA SMTQRAGRAG RLAPGICLHL LAKEQAGRAA
AQSDPEILHS DLSGLLMEVL QWGCHDPASL FWLDRPPEVN LQAARRLLLM LGALEGERLS
ARGQKMAATG NEPRLAAMLV NAGEGDSAAT AAMLAAILED PPRGGGTDLS VLFSRRQPGW
QQRSQQLLKR LQVRNGEPDS ALIMPLLARA FSDRIARRRG QEGRYQLANG MGAMLDADDA
LGRHEWLIAP LLLQGSASPD ARILLAQPLD IASLIQACPD LLRQSDTVEW DEAQGTLKAW
RRMRIGQLTV SVQPLAKPSE EELHQAMLNG IRDKGLAVLN WTPEAEQFRL RLHCAAKWLP
EYDWPAVDEA SLLATLENWL LPHMTGVQSL RSLKSLNVTQ ALRGLLDYAM LQRLDSELPG
HYTVPTGSRI TIRYHEDNPP ALAVRMQEMF GEAKTPTIAQ GRVPLVLELL SPAQRPLQIT
RDLSAFWQGA YREVQKEMKG RYPKHVWPDD PANTAPTRRT KKYS
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