Gene SeSA_A0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0216 
Symbol 
ID6517742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp224383 
End bp224913 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content62% 
IMG OID642745384 
Product2'-5' RNA ligase 
Protein accessionYP_002113216 
Protein GI194734813 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGC CAAAACGGCT GTTTTTTGCG ATTGACTTAC CCGACGACGC GCGCACGCAA 
ATTATCGCCT GGCGCGCCGC TCATTTTGCG TCTGAAGACG GACGCCCCGT CGCAGCGGCG 
AACCTGCACC TGACGCTGGC CTTTTTAGGC GACGTCAGTA ACGATAAGCA GCGCGCGCTT 
GCGCAACTGG CCGGACGAAT TCGCCAGCCG GGCTTTACGC TACATCTGGA TGACGCCGGT 
CAGTGGCTGC GTTCACGCGT GGTGTGGCTG GGGATGCGCC AGCCGCCGCG CGGGTTGTTG 
CAGTTGGCTA ATATGCTGCG CGCGCAGGCC GCCCGCAGCG GTTGTTACCA AAGCCCGCAG 
CCTTTTCACC CGCATATTAC GCTGCTGCGC GACGCCAGCC ATACGGTGGC TATCCCGCCG 
CCGGGCTTTT GCTGGTCATT TCCGGTCACG TCATTTGCGC TTTACGCCTC TTCGTATGGG 
CAAGGCCGTA CCCGCTATGC CGAGCTGCAG CGCTGGACGC TGGGCGAATA A
 
Protein sequence
MSEPKRLFFA IDLPDDARTQ IIAWRAAHFA SEDGRPVAAA NLHLTLAFLG DVSNDKQRAL 
AQLAGRIRQP GFTLHLDDAG QWLRSRVVWL GMRQPPRGLL QLANMLRAQA ARSGCYQSPQ 
PFHPHITLLR DASHTVAIPP PGFCWSFPVT SFALYASSYG QGRTRYAELQ RWTLGE