| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0195 |
|---|
| Symbol | |
|---|
| ID | 6517485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 206546 |
|---|
| End bp | 207229 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642745363 |
|---|
| Product | chaperone protein FimC |
|---|
| Protein accession | YP_002113195 |
|---|
| Protein GI | 194736071 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.857802 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.345309 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCAT TGGCTAAAGC AGGGTTGCTT TGTTGCCTGT TGTGCGGTTC GCTGGCGCAT
GCCGCAGGGA TAAACATCGG CGCAACGCGG GTTATTTTTC ACGGCGATGC CAAAGATGCA
TCCATATCGA TAAGCAATAG CGACAACGTT CCCTATTTAA TTCAGTCCTG GGCGCAATCG
ATCAGCGAAA CCGGGGCGAT CGGCGATGCG CCGTTTATGG TCACCCCGCC GCTTTTTCGC
CTTAATGGCG GGCAAAAGAA CGTACTGCGA ATTATCCGTA CCGGCGGCAA TTTGCCGGAA
GATCGCGAGT CGCTGTACTG GCTGGATATT AAATCGATTC CCAGCAGCAA TCCGGACAAT
AAGCACAATA CGCTCATGCT GGCCGTTAAA GCGGAATTTA AGCTGATTTA CCGGCCAAAA
GCGTTAACCC AAAAGCCAGA AGAGGTTGCC GATCGGTTAA CGTGGTCGCG TCAGGGTCGC
ACGCTCACCG TGAAGAACCC CACGCCCTAT TATATGAACT TCGCCACCCT TTCCGTTGGC
AGTCAAAAAA TAAAAGCCCC GCGCTATGTG GCGCCTTTCG GCAACGCGCA GTACACGCTG
CCTGCCGCCG CCAGCGGCCC GATCGCCTGG TCTATCATCA ACGATTTTGG CGGTACTGGC
CCCGAACATA AACAAACGCC TTGA
|
|---|
| Protein sequence | MNSLAKAGLL CCLLCGSLAH AAGINIGATR VIFHGDAKDA SISISNSDNV PYLIQSWAQS
ISETGAIGDA PFMVTPPLFR LNGGQKNVLR IIRTGGNLPE DRESLYWLDI KSIPSSNPDN
KHNTLMLAVK AEFKLIYRPK ALTQKPEEVA DRLTWSRQGR TLTVKNPTPY YMNFATLSVG
SQKIKAPRYV APFGNAQYTL PAAASGPIAW SIINDFGGTG PEHKQTP
|
|---|
| |